Evidence map›Paper›PMID 34048572›Full record

ArticleNucleic acids research2021

Post-translational modification of RNA m6A demethylase ALKBH5 regulates ROS-induced DNA damage response.

Fang Yu, Jiangbo Wei, Xiaolong Cui, Chunjie Yu, Wei Ni, Jörg Bungert, Lizi Wu, Chuan He, Zhijian Qian

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 153 papers.

0numbers the graph read from it
0cells of the map it votes in
153citing papers in PubMed
12.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

153 citing papers in PubMed, 223 citations in OpenAlex.

  1. Review
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93 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Fang YuDepartment of Medicine, UF Health Cancer Center, University of Florida, Gainesville, FL 32610, USA.
Jiangbo WeiDepartment of Chemistry, Department of Biochemistry and Molecular Biology, and Institute for Biophysical Dynamics, The University of Chicago, 929 East 57th Street, Chicago, IL 60637, USA.ORCID 0000-0003-2691-6490
Xiaolong CuiDepartment of Chemistry, Department of Biochemistry and Molecular Biology, and Institute for Biophysical Dynamics, The University of Chicago, 929 East 57th Street, Chicago, IL 60637, USA.
Chunjie YuDepartment of Medicine, UF Health Cancer Center, University of Florida, Gainesville, FL 32610, USA.
Wei NiDepartment of Molecular Genetics and Microbiology, UF Genetic Institute, University of Florida, FL 32610, USA.
Jörg BungertDepartment of Biochemistry and Molecular Biology, University of Florida, Gainesville, FL 32610, USA.ORCID 0000-0003-1801-9706
Lizi WuDepartment of Molecular Genetics and Microbiology, UF Genetic Institute, University of Florida, FL 32610, USA.ORCID 0000-0002-0076-2617
Chuan HeDepartment of Chemistry, Department of Biochemistry and Molecular Biology, and Institute for Biophysical Dynamics, The University of Chicago, 929 East 57th Street, Chicago, IL 60637, USA.
Zhijian QianDepartment of Medicine, UF Health Cancer Center, University of Florida, Gainesville, FL 32610, USA.ORCID 0000-0001-5565-7534
Howard Hughes Medical Institute · USUniversity of Florida · USUniversity of Florida Health · US

Funding

Transcriptome-wide base-resolution sequencing of pseudouridine in human normal and AD brain tissues-CEGS Admin supplement 2020-2021RM1HG008935 · NHGRI · UNIVERSITY OF CHICAGO · PI HE, CHUAN · 2016 to 2025
$24.4M
Signaling and Targeting of CRTC1-MAML2 Fusion Oncoprotein in Salivary Gland TumorR01DE023641 · NIDCR · UNIVERSITY OF FLORIDA · PI Lizi Wu · 2014 to 2026
$3.3M
The role of EVI1-induced hypermethylation in leukemogenesis.R01HL131444 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI QIAN, ZHIJIAN · 2016 to 2019
$1.6M
The molecular mechanism of clonal dominance in 5q(del) MDSR01DK107615 · NIDDK · UNIVERSITY OF ILLINOIS AT CHICAGO · PI QIAN, ZHIJIAN · 2016 to 2019
$1.4M
Howard Hughes Medical InstituteNHGRI NIH HHS RM1 HG008935NHLBI NIH HHS R01 HL131444NIDDK NIH HHS R01 DK107615
6 · The paper itself

Abstract

Faithful genome integrity maintenance plays an essential role in cell survival. Here, we identify the RNA demethylase ALKBH5 as a key regulator that protects cells from DNA damage and apoptosis during reactive oxygen species (ROS)-induced stress. We find that ROS significantly induces global mRNA N6-methyladenosine (m6A) levels by modulating ALKBH5 post-translational modifications (PTMs), leading to the rapid and efficient induction of thousands of genes involved in a variety of biological processes including DNA damage repair. Mechanistically, ROS promotes ALKBH5 SUMOylation through activating ERK/JNK signaling, leading to inhibition of ALKBH5 m6A demethylase activity by blocking substrate accessibility. Moreover, ERK/JNK/ALKBH5-PTMs/m6A axis is activated by ROS in hematopoietic stem/progenitor cells (HSPCs) in vivo in mice, suggesting a physiological role of this molecular pathway in the maintenance of genome stability in HSPCs. Together, our study uncovers a molecular mechanism involving ALKBH5 PTMs and increased mRNA m6A levels that protect genomic integrity of cells in response to ROS.

Indexed as

DNA DamageDNA RepairAlkB Homolog 5, RNA DemethylaseAnimalsApoptosisBone Marrow CellsCell Line, TumorDemethylationFanconi Anemia Complementation Group ProteinsGene Expression RegulationHematopoietic Stem CellsHumansHydrogen PeroxideMAP Kinase Signaling SystemMethylationMiceALKBH5 protein, humanALKBH5 protein, mouseAlkB Homolog 5, RNA DemethylaseATRX protein, humanFAAP20 protein, humanFanconi Anemia Complementation Group ProteinsHydrogen PeroxideIGF2BP1 protein, humanReactive Oxygen SpeciesRNA-Binding ProteinsRNA, Small InterferingX-linked Nuclear Protein

Identifiers

PMID34048572
PMCPMC8191756
OpenAlexW3164515581

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.