Evidence map›Paper›PMID 34047495›Full record

ArticleCancer medicine2021

Signature based on metabolic-related gene pairs can predict overall survival of osteosarcoma patients.

Long-Qing Li, Liang-Hao Zhang, Yao-Bo Yuan, Xin-Chang Lu, Yi Zhang, Yong-Kui Liu, Jia Wen, Manhas Abdul Khader, Tao Liu, Jia-Zhen Li and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Long-Qing LiDepartment of Orthopaedic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, PR China.
Liang-Hao ZhangDepartment of Urology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, PR China.ORCID 0000-0003-3298-2638
Yao-Bo YuanDepartment of Orthopaedic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, PR China.
Xin-Chang LuDepartment of Orthopaedic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, PR China.
Yi ZhangDepartment of Orthopaedic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, PR China.ORCID 0000-0002-0521-357X
Yong-Kui LiuDepartment of Orthopaedic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, PR China.
Jia WenDepartment of Orthopaedic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, PR China.
Manhas Abdul KhaderDepartment of Orthopaedic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, PR China.
Tao LiuDepartment of Orthopedics, Gushi County People's Hospital, Xinyang, Henan, PR China.
Jia-Zhen LiDepartment of Orthopaedic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, PR China.ORCID 0000-0002-6416-4296
Yan ZhangDepartment of Orthopaedic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, PR China.
First Affiliated Hospital of Zhengzhou University · CN

Funding

Foundation of Henan Educational Committee 20B320027Henan Institute of Science and Technology 182102310370Henan Institute of Science and Technology 192102310389
6 · The paper itself

Abstract

backgroundOsteosarcoma is a tumour of malignant origin in children and adolescents. Recent progression indicates that it is necessary to develop new therapies to improve the patient's prognosis rather than strengthen anti-tumour chemotherapy. Researchers recently realised that cancer is a kind of disease with a metabolic disorder, and metabolic reprogramming is becoming a new cancer hallmark. Hence, our study's primary purpose is to explore the value of genes related to osteosarcoma metabolism.

methodsFrom public databases, three osteosarcoma datasets with adequate clinical information were obtained. Besides, the IMvigor dataset through the 'IMvigor' package as a supplement was downloaded, the metabolic-related genes were identified, and these genes were used to construct the metabolic-related gene pairs (MRGP). Based on the prognosis-related MRGP, two molecular subtypes were identified. There are significant differences in the metabolic characteristics between the two molecular subtypes. Subsequently, the MRGP signature is constructed using the least absolute shrinkage and selection operator regression method. Finally, use SubMap analysis to evaluate the response of patients in the MRPG signature group to immunotherapy.

resultsThe MRGP signature can reliably predict overall survival in patients with osteosarcoma. The MRGP signature is also associated with osteosarcoma patients' metastatic status and can be used for subsequent risk classification of metastatic patients. The immunotherapy is more likely to benefit the patients in the MRGP low-risk group.

conclusionMetabolic-related gene pairs signature can assess the prognosis of patients with osteosarcoma.

Indexed as

Gene Expression ProfilingTranscriptomeAdolescentBone NeoplasmsChildDatabases, GeneticFemaleGenetic VariationHumansImmunotherapyMaleNomogramsOsteosarcomaPrognosisRegression Analysismetabolic reprogrammingMRGPosteosarcomaprognosisTCGAtumour immunology

Identifiers

PMID34047495
PMCPMC8267140
OpenAlexW3164161408

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.