Evidence map›Paper›PMID 34046609›Full record

ArticleRSC medicinal chemistry2021

Deacylcortivazol-like pyrazole regioisomers reveal a more accommodating expanded binding pocket for the glucocorticoid receptor.

Jessica A O Zimmerman, Mimi Fang, Bintou Doumbia, Alexis Neyman, Ji Hyeon Cha, Michael Thomas, Bonnie Hall, Meng Wu, Anne M Wilson, Miles A Pufall

Open access · greenAbstract read
In one paragraph

Article in RSC medicinal chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jessica A O ZimmermanDepartment of Biochemistry, Carver College of Medicine, University of Iowa Iowa City IA USA miles-pufall@uiowa.edu.ORCID https://orcid.org/0000-0001-7438-1684
Mimi FangDepartment of Biochemistry, Carver College of Medicine, University of Iowa Iowa City IA USA miles-pufall@uiowa.edu.
Bintou DoumbiaDepartment of Chemistry, Butler University Indianapolis IN USA amwilson@butler.edu.
Alexis NeymanDepartment of Chemistry, Butler University Indianapolis IN USA amwilson@butler.edu.
Ji Hyeon ChaDepartment of Chemistry, Butler University Indianapolis IN USA amwilson@butler.edu.
Michael ThomasDepartment of Chemistry, Butler University Indianapolis IN USA amwilson@butler.edu.
Bonnie HallGrand View University Des Moines IA USA.
Meng WuDepartment of Biochemistry, Carver College of Medicine, University of Iowa Iowa City IA USA miles-pufall@uiowa.edu.ORCID https://orcid.org/0000-0003-2222-0736
Anne M WilsonDepartment of Chemistry, Butler University Indianapolis IN USA amwilson@butler.edu.ORCID https://orcid.org/0000-0003-0463-0280
Miles A PufallDepartment of Biochemistry, Carver College of Medicine, University of Iowa Iowa City IA USA miles-pufall@uiowa.edu.ORCID https://orcid.org/0000-0002-7022-6916
Butler University · USUniversity of Iowa · USGrand View University · US

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Christopher K Laubenthal · 2000 to 2026
$70.0M
Core-based Scientist specializing in high throughput screening for early drug discovery, target identification and systems biology analysis of cancerR50CA243786 · NCI · UNIVERSITY OF IOWA · PI WU, MENG · 2019 to 2023
$935k
High Throughput Drug Screening RobotS10RR029274 · NCRR · UNIVERSITY OF IOWA · PI RICE, KEVIN G · 2011 to 2011
$730k
NCI NIH HHS P30 CA086862NCI NIH HHS R50 CA243786NCRR NIH HHS S10 RR029274
6 · The paper itself

Abstract

Glucocorticoids (GCs) are widely used, potent anti-inflammatory and chemotherapeutic drugs. They work by binding to the glucocorticoid receptor (GR), a ligand-activated transcription factor, inducing translocation to the nucleus and regulation of genes that influence a variety of cellular activities. Despite being effective for a broad number of conditions, GC use is limited by severe side effects. To identify ligands that are more selective, we synthesized pairs of regioisomers in the pyrazole ring that probe the expanded binding pocket of GR opened by deacylcortivazol (DAC). Using an Ullmann-type reaction, a deacylcortivazol-like (DAC-like) backbone was modified with five pendant groups at the 1'- and 2'-positions of the pyrazole ring, yielding 9 ligands. Most of the compounds were cytotoxic to leukemia cells, and all required GR expression. Both aliphatic and other aromatic groups substituted at the 2'-position produced ligands with GC activity, with phenyl and 4-fluorophenyl substitutions exhibiting high cellular affinity for the receptor and >5× greater potency than dexamethasone, a commonly used strong GC. Surprisingly, phenyl substitution at the 1'-position produced a high-affinity ligand with ∼10× greater potency than dexamethasone, despite little apparent room in the expanded binding pocket to accommodate 1'-modifications. Other 1'-modifications, however, were markedly less potent. The potency of the 2'-substituted and 1'-substituted DAC-like compounds tracked linearly with cellular affinity but had different slopes, suggesting a different mode of interaction with GR. These data provide evidence that the expanded binding pocket opened by deacylcortivazol is more accommodating that expected, allowing development of new, and possibly selective, GCs by substitution within the pyrazole ring.

Identifiers

PMID34046609
PMCPMC8127617
OpenAlexW3112157998

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.