ArticleScientific reports2021
Draft genome sequence of the pulse crop blackgram [Vigna mungo (L.) Hepper] reveals potential R-genes.
Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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23 citing papers in PubMed.
- Validation and fine mapping of qVmunBr6.2 locus reveal a gene encoding hevamine-A, a defense protein with chitinase activity, is associated with bruchid (Callosobruchus maculatus) resistance in black gram (Vigna mungo).Scientific reports · 2026Article
- Development of SCAR and rapid detection of YMV resistant genotypes of blackgram through qRT-PCR based absolute quantification.Molecular biology reports · 2026Article
- High-contiguity genome assembly of moth bean (Frontiers in plant science · 2026Article
- Comparison of Genomes of Species fromInternational journal of molecular sciences · 2025Article
- Research and developmental strategies to hasten the improvement of orphan crops.GM crops & food · 2025Review
- Whole genome sequencing reveals transcriptional and translational elements potentially regulating biotic and abiotic stress responses in cowpea.Scientific reports · 2025Article
- Telomere-to-telomere, gap-free genome of mung bean (Horticulture research · 2025Article
- Exploring the physiological, biochemical, and enzymatic responses of Vigna mungo varieties to Mungbean Yellow Mosaic India Virus (MYMIV) infection.Scientific reports · 2025Article
- Review
- Species of the SectionsInternational journal of molecular sciences · 2024Review
- Plant Biotechnology-An Indispensable Tool for Crop Improvement.Plants (Basel, Switzerland) · 2024Article
- Article
- Genetics, genomics, and breeding of black gram [Frontiers in plant science · 2023Review
- Transcriptomic and biochemical analyses of drought response mechanism in mung bean (Vignaradiata (L.) Wilczek) leaves.PloS one · 2023Article
- Mining legume germplasm for genetic gains: An Indian perspective.Frontiers in genetics · 2023Review
- De novo assembly and characterization of the draft genome of the cashew (Anacardium occidentale L.).Scientific reports · 2022Article
- Beyond a reference genome: pangenomes and population genomics of underutilized and orphan crops for future food and nutrition security.The New phytologist · 2022Review
- Unlocking the hidden variation from wild repository for accelerating genetic gain in legumes.Frontiers in plant science · 2022Review
- Genome-Wide Analysis of Late Embryogenesis Abundant Protein Gene Family inFrontiers in plant science · 2022Article
- Integration of Genomic and Cytogenetic Data on Tandem DNAs for Analyzing the Genome Diversity Within the GenusFrontiers in plant science · 2022Article
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4 authors.
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No grant is acknowledged in the PubMed record.
Abstract
Blackgram [Vigna mungo (L.) Hepper] (2n = 2x = 22), an important Asiatic legume crop, is a major source of dietary protein for the predominantly vegetarian population. Here we construct a draft genome sequence of blackgram, for the first time, by employing hybrid genome assembly with Illumina reads and third generation Oxford Nanopore sequencing technology. The final de novo whole genome of blackgram is ~ 475 Mb (82% of the genome) and has maximum scaffold length of 6.3 Mb with scaffold N50 of 1.42 Mb. Genome analysis identified 42,115 genes with mean coding sequence length of 1131 bp. Around 80.6% of predicted genes were annotated. Nearly half of the assembled sequence is composed of repetitive elements with retrotransposons as major (47.3% of genome) transposable elements, whereas, DNA transposons made up only 2.29% of the genome. A total of 166,014 SSRs, including 65,180 compound SSRs, were identified and primer pairs for 34,816 SSRs were designed. Out of the 33,959 proteins, 1659 proteins showed presence of R-gene related domains. KIN class was found in majority of the proteins (905) followed by RLK (239) and RLP (188). The genome sequence of blackgram will facilitate identification of agronomically important genes and accelerate the genetic improvement of blackgram.
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