Evidence map›Paper›PMID 34044884›Full record

ArticleBiology of sex differences2021

A cross-cohort analysis of autosomal DNA methylation sex differences in the term placenta.

Amy M Inkster, Victor Yuan, Chaini Konwar, Allison M Matthews, Carolyn J Brown, Wendy P Robinson

Open access · goldAbstract read
In one paragraph

Article in Biology of sex differences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 2 pooled it
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 2 syntheses or guidelines pooled it, 62 citations in OpenAlex.

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  15. Molecular pathways in placental-fetal development and disruption.Molecular and cellular endocrinology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Amy M InksterBC Children's Hospital Research Institute, 950 W 28th Ave, Vancouver, V6H 3N1, Canada.
Victor YuanBC Children's Hospital Research Institute, 950 W 28th Ave, Vancouver, V6H 3N1, Canada.
Chaini KonwarBC Children's Hospital Research Institute, 950 W 28th Ave, Vancouver, V6H 3N1, Canada.
Allison M MatthewsBC Children's Hospital Research Institute, 950 W 28th Ave, Vancouver, V6H 3N1, Canada.
Carolyn J BrownDepartment of Medical Genetics, University of British Columbia, 4500 Oak St, Vancouver, V6H 3N1, Canada.
Wendy P RobinsonBC Children's Hospital Research Institute, 950 W 28th Ave, Vancouver, V6H 3N1, Canada. wrobinson@bcchr.ca.ORCID 0000-0002-2010-6174
University of British Columbia · CAiCo Therapeutics (Canada) · CA

Funding

CIHR F19-04091CIHR GSK-171375CIHR SVB-158613
6 · The paper itself

Abstract

backgroundHuman placental DNA methylation (DNAme) data is a valuable resource for studying sex differences during gestation, as DNAme profiles after delivery reflect the cumulative effects of gene expression patterns and exposures across gestation. Here, we present an analysis of sex differences in autosomal DNAme in the uncomplicated term placenta (n = 343) using the Illumina 450K array.

resultsAt a false discovery rate < 0.05 and a mean sex difference in DNAme beta value of > 0.10, we identified 162 autosomal CpG sites that were differentially methylated by sex and replicated in an independent cohort of samples (n = 293). Several of these differentially methylated CpG sites were part of larger correlated regions of sex differential DNAme. Although global DNAme levels did not differ by sex, the majority of significantly differentially methylated CpGs were more highly methylated in male placentae, the opposite of what is seen in differential methylation analyses of somatic tissues. Patterns of autosomal DNAme at these 162 CpGs were significantly associated with maternal age (in males) and newborn birthweight standard deviation (in females).

conclusionsOur results provide a comprehensive analysis of sex differences in autosomal DNAme in the term human placenta. We report a list of high-confidence autosomal sex-associated differentially methylated CpGs and identify several key features of these loci that suggest their relevance to sex differences observed in normative and complicated pregnancies.

Indexed as

DNA MethylationSex CharacteristicsBirth WeightCohort StudiesFemaleHumansInfant, NewbornMalePlacentaPregnancyDNA methylationEpigeneticsIllumina 450K arrayMicroarrayPlacentaPregnancySex as a biological variableSex differences

Identifiers

PMID34044884
PMCPMC8162041
OpenAlexW3165333398

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.