Evidence map›Paper›PMID 34044837›Full record

ArticleMalaria journal2021

Genetic diversity of Plasmodium falciparum populations in three malaria transmission settings in Madagascar.

Fanomezantsoa Ralinoro, Tovonahary Angelo Rakotomanga, Rianasoambolanoro Rakotosaona, Danielle A Doll Rakoto, Didier Menard, Victor Jeannoda, Arsene Ratsimbasoa

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

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  11. Evidence of a Recent Bottleneck inPathogens (Basel, Switzerland) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Fanomezantsoa Ralinoro *National Malaria Control Programme of Madagascar, Androhibe, Antananarivo, Madagascar. ral.fano@yahoo.fr.ORCID http://orcid.org/0000-0002-4755-4241
Tovonahary Angelo RakotomangaNational Malaria Control Programme of Madagascar, Androhibe, Antananarivo, Madagascar.
Rianasoambolanoro RakotosaonaCentre National d'Application de Recherches Pharmaceutiques, Analamahitsy, Antananarivo, Madagascar.
Danielle A Doll RakotoFaculty of Sciences, University of Antananarivo, Antananarivo, Madagascar.
Didier MenardMalaria Genetics and Resistance Unit and INSERM U1201, Institut Pasteur Paris, Paris, France.
Victor JeannodaFaculty of Sciences, University of Antananarivo, Antananarivo, Madagascar.
Arsene Ratsimbasoa *National Malaria Control Programme of Madagascar, Androhibe, Antananarivo, Madagascar. aratsimbasoa@gmail.com.
University of Antananarivo · MGInserm · FRNational Application Center for Pharmaceutical Research · MGUniversité de Fianarantsoa · MG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAssessment of the genetic diversity of Plasmodium falciparum parasites from various malaria transmission settings could help to define tailored local strategies for malaria control and elimination. Such assessments are currently scarce in Madagascar. The study presented here aimed to bridge this gap by investigating the genetic diversity of P. falciparum populations in three epidemiological strata (Equatorial, Tropical and Fringes) in Madagascar.

methodsTwo-hundred and sixty-six P. falciparum isolates were obtained from patients with uncomplicated malaria enrolled in clinical drug efficacy studies conducted at health centres in Tsaratanana (Equatorial stratum), Antanimbary (Tropical stratum) and Anjoma Ramartina (Fringes) in 2013 and 2016. Parasite DNA was extracted from blood samples collected before anti-malarial treatment. Plasmodium species were identified by nested PCR targeting the 18 S rRNA gene. The genetic profiles of P. falciparum parasites were defined by allele-specific nested PCR on the polymorphic regions of the msp-1 and msp-2 genes.

resultsFifty-eight alleles were detected in the P. falciparum samples tested: 18 alleles for msp-1 and 40 for msp-2. K1 (62.9%, 139/221) and FC27 (69.5%, 114/164) were the principal msp-1 and msp-2 allele families detected, although the proportions of the msp-1 and msp-2 alleles varied significantly between sites. Polyclonal infections were more frequent at sites in the Equatorial stratum (69.8%) than at sites in the Tropical stratum (60.5%) or Fringes (58.1%). Population genetics analyses showed that genetic diversity was similar between sites and that parasite flow within sites was limited.

conclusionsThis study provides recent information about the genetic diversity of P. falciparum populations in three transmission strata in Madagascar, and valuable baseline data for further evaluation of the impact of the control measures implemented in Madagascar.

Indexed as

Genetic VariationMadagascarMalaria, FalciparumPlasmodium falciparumGenetic diversityMadagascarMalariamsp-1msp-2 genePlasmodium falciparum

Identifiers

PMID34044837
PMCPMC8161981
OpenAlexW3127986423

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.