Evidence map›Paper›PMID 34043036›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2021

CsKTN1 for a katanin p60 subunit is associated with the regulation of fruit elongation in cucumber (Cucumis sativus L.).

Hui Wang, Jing Sun, Fan Yang, Yiqun Weng, Peng Chen, Shengli Du, Aimin Wei, Yuhong Li

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  4. Review
  5. Review
  6. Article
  7. A mutation in CsGME encoding GDP-mannose 3,5-epimerase results in little and wrinkled leaf in cucumber.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Morphological and Genetic Diversity of Cucumber (Plants (Basel, Switzerland) · 2022
    Review
  13. Article
  14. Review
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Hui WangCollege of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Jing SunCollege of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Fan YangCollege of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Yiqun WengHorticulture Department, USDA-ARS Vegetable Crops Research Unit, University of Wisconsin, Madison, WI, 53706, USA.
Peng ChenCollege of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Shengli DuTianjin Vegetable Research Center, Tianjin, 300192, China.
Aimin WeiTianjin Vegetable Research Center, Tianjin, 300192, China. waimin163@163.com.
Yuhong LiCollege of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China. liyuhong73@nwsuaf.edu.cn.ORCID http://orcid.org/0000-0002-9852-8107
Northwest A&F University · CNNanjing Institute of Vegetable Science · CNNorth West Agriculture and Forestry University · CNTianjin Conservatory of Music · CNUniversity of Wisconsin–Madison · US

Funding

Agriculture and Food Research Initiative competitive grant of the USDA National Institute of Food and Agriculture 2017-67013-26195National Key Research and Development Program of China 2016YFD0101900National Natural Science Foundation of China 31772300National Natural Science Foundation of China 31860557
6 · The paper itself

Abstract

key messageWe identified a short fruit3 (sf3) mutant in cucumber. Map-based cloning revealed that CsKTN1 gene encodes a katanin p60 subunit, which is associated with the regulation of fruit elongation. Fruit length is an important horticultural trait for both fruit yield and quality of cucumber (Cucumis sativus L.). Knowledge on the molecular regulation of fruit elongation in cucumber is very limited. In this study, we identified and characterized a cucumber short fruit3 (sf3) mutant. Histological examination indicated that the shorter fruit in the mutant was due to reduced cell numbers. Genetic analysis revealed that the phenotype of the sf3 mutant was controlled by a single gene with semi-dominant inheritance. By map-based cloning and Arabidopsis genetic transformation, we showed that Sf3 was a homolog of KTN1 (CsKTN1) encoding a katanin p60 subunit. A non-synonymous mutation in the fifth exon of CsKTN1 resulted in an amino acid substitution from Serine in the wild type to Phenylalanine in the sf3 mutant. CsKTN1 expressed in all tissues of both the wild type and the sf3 mutant. However, there was no significant difference in CsKTN1 expression levels between the wild type and the sf3 mutant. The hormone quantitation and RNA-seq analysis suggested that auxin and gibberellin contents are decreased in sf3 by changing the expression levels of genes related with auxin and gibberellin metabolism and signaling. This work helps understand the function of the katanin and the molecular mechanisms of fruit growth regulation in cucumber.

Indexed as

Gene Expression Regulation, PlantPhenotypeChromosome MappingCucumis sativusFruitGene Expression ProfilingKataninPlant ProteinsProtein SubunitsRNA-SeqKataninPlant ProteinsProtein Subunits

Identifiers

PMID34043036
OpenAlexW3164142426

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.