Evidence map›Paper›PMID 34040190›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2021

Somatic PIK3R1 variation as a cause of vascular malformations and overgrowth.

Catherine E Cottrell, Nicole R Bender, Michael T Zimmermann, Jonathan W Heusel, Meagan Corliss, Michael J Evenson, Vincent Magrini, Donald J Corsmeier, Matthew Avenarius, Jeffrey N Dudley and 13 more

Open access · hybridAbstract read
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 59 citations in OpenAlex.

  1. A PMS2-deficient pediatric high-grade glioma with PI3K-pathway mutations and adjacent developmental venous anomaly suggestive of CMMRD.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2026
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  10. Assessing Protein Surface-Based Scoring for Interpreting Genomic Variants.International journal of molecular sciences · 2024
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  16. Updates in Genetic Testing for Head and Neck Vascular Anomalies.Oral and maxillofacial surgery clinics of North America · 2024
    Review
  17. Association Between theInternational journal of general medicine · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 14 institutions in 2 countries.

Catherine E CottrellThe Steve and Cindy Rasmussen Institute for Genomic Medicine at Nationwide Children's Hospital, Columbus, OH, USA.
Nicole R BenderDepartment of Dermatology, University of Florida, Gainesville, FL, USA.
Michael T ZimmermannBioinformatics Research and Development Laboratory, Genomic Sciences and Precision Medicine Center, Medical College of Wisconsin, Milwaukee, WI, USA.
Jonathan W HeuselDepartment of Pathology & Immunology, Washington University School of Medicine, Saint Louis, MO, USA.
Meagan CorlissDepartment of Pathology & Immunology, Washington University School of Medicine, Saint Louis, MO, USA.
Michael J EvensonDepartment of Pathology & Immunology, Washington University School of Medicine, Saint Louis, MO, USA.
Vincent MagriniThe Steve and Cindy Rasmussen Institute for Genomic Medicine at Nationwide Children's Hospital, Columbus, OH, USA.
Donald J CorsmeierThe Steve and Cindy Rasmussen Institute for Genomic Medicine at Nationwide Children's Hospital, Columbus, OH, USA.
Matthew AvenariusDepartment of Pathology and Laboratory Medicine, The Ohio State University Wexner Medical Center, Columbus, OH, USA.
Jeffrey N DudleyCenter for Precision Health Research, National Human Genome Research Institute, Bethesda, MD, USA.
Jennifer J JohnstonCenter for Precision Health Research, National Human Genome Research Institute, Bethesda, MD, USA.
Marjorie J LindhurstCenter for Precision Health Research, National Human Genome Research Institute, Bethesda, MD, USA.
Katinka Vigh-ConradDivision of Genetics, Oregon National Primate Research Center, Oregon Health & Science University, Portland, OR, USA.
Olivia M T DaviesMedical College of Wisconsin, Milwaukee, WI, USA.
Carrie C CoughlinDivision of Dermatology, Departments of Medicine and Pediatrics, Washington University School of Medicine, Saint Louis, MO, USA.
Ilona J FriedenDepartment of Dermatology, University of California-San Francisco, San Francisco, CA, USA.
Megha TollefsonDepartments of Dermatology and Pediatrics, Mayo Clinic, Rochester, MN, USA.
Andrea L ZaengleinDermatology and Pediatrics, Penn State Hershey Medical Center, Hershey, PA, USA.
Heather CilibertoTown Square Dermatology, Coralville, IA, USA.
Laura L TosiDivision of Orthopaedics & Sports Medicine, Children's National Hospital, Washington, DC, USA.
Robert K SempleCentre for Cardiovascular Science, University of Edinburgh, Edinburgh, United Kingdom.
Leslie G BieseckerCenter for Precision Health Research, National Human Genome Research Institute, Bethesda, MD, USA.
Beth A DroletUniversity of Wisconsin-Madison School of Medicine and Public Health, Madison, WI, USA. bdrolet@dermatology.wisc.edu.ORCID 0000-0002-0844-7195
Washington University in St. Louis · USNational Human Genome Research Institute · USNationwide Children's Hospital · USMedical College of Wisconsin · USChildren's National · USMayo Clinic in Arizona · USOregon National Primate Research Center · USPenn State Milton S. Hershey Medical Center · USThe Ohio State University Wexner Medical Center · USUniversity of California, San Francisco · USUniversity of Edinburgh · GBUniversity of Florida · USUniversity of Michigan · USUniversity of Wisconsin–Madison · US

Funding

Rare & Mosaic Disorders Molecular ResearchZIAHG200328 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BIESECKER, LESLIE · 2009 to 2025
$26.8M
Clinical and Molecular Studies of MalformationsZ01HG200328 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BIESECKER, LESLIE G · 2005 to 2008
$5.5M
Intramural NIH HHS Z01 HG200328Wellcome Trust
6 · The paper itself

Abstract

purposeSomatic activating variants in the PI3K-AKT pathway cause vascular malformations with and without overgrowth. We previously reported an individual with capillary and lymphatic malformation harboring a pathogenic somatic variant in PIK3R1, which encodes three PI3K complex regulatory subunits. Here, we investigate PIK3R1 in a large cohort with vascular anomalies and identify an additional 16 individuals with somatic mosaic variants in PIK3R1.

methodsAffected tissue from individuals with vascular lesions and overgrowth recruited from a multisite collaborative network was studied. Next-generation sequencing targeting coding regions of cell-signaling and cancer-associated genes was performed followed by assessment of variant pathogenicity.

resultsThe phenotypic and variant spectrum associated with somatic variation in PIK3R1 is reported herein. Variants occurred in the inter-SH2 or N-terminal SH2 domains of all three PIK3R1 protein products. Phenotypic features overlapped those of the PIK3CA-related overgrowth spectrum (PROS). These overlapping features included mixed vascular malformations, sandal toe gap deformity with macrodactyly, lymphatic malformations, venous ectasias, and overgrowth of soft tissue or bone.

conclusionSomatic PIK3R1 variants sharing attributes with cancer-associated variants cause complex vascular malformations and overgrowth. The PIK3R1-associated phenotypic spectrum overlaps with PROS. These data extend understanding of the diverse phenotypic spectrum attributable to genetic variation in the PI3K-AKT pathway.

Indexed as

Limb Deformities, CongenitalVascular MalformationsClass Ia Phosphatidylinositol 3-KinaseHumansMutationPhosphatidylinositol 3-KinasesSignal TransductionClass Ia Phosphatidylinositol 3-KinasePhosphatidylinositol 3-KinasesPIK3R1 protein, human

Identifiers

PMID34040190
PMCPMC8486672
OpenAlexW3165101377

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.