Evidence map›Paper›PMID 34040101›Full record

ArticleScientific reports2021

In Arabidopsis thaliana Cd differentially impacts on hormone genetic pathways in the methylation defective ddc mutant compared to wild type.

Marianna Pacenza, Antonella Muto, Adriana Chiappetta, Lorenzo Mariotti, Emanuela Talarico, Piero Picciarelli, Ernesto Picardi, Leonardo Bruno, Maria Beatrice Bitonti

Open access · goldAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 34 citations in OpenAlex.

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  13. Key Pathways and Genes ofPlants (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Marianna PacenzaDepartment of Biology, Ecology and Earth Science, University of Calabria, Arcavacata di Rende, CS, Italy.
Antonella MutoDepartment of Biology, Ecology and Earth Science, University of Calabria, Arcavacata di Rende, CS, Italy.
Adriana ChiappettaDepartment of Biology, Ecology and Earth Science, University of Calabria, Arcavacata di Rende, CS, Italy.
Lorenzo MariottiDepartment of Agriculture, Food and Environment, University of Pisa, Pisa, PI, Italy.
Emanuela TalaricoDepartment of Biology, Ecology and Earth Science, University of Calabria, Arcavacata di Rende, CS, Italy.
Piero PicciarelliDepartment of Agriculture, Food and Environment, University of Pisa, Pisa, PI, Italy.
Ernesto PicardiDepartment of Biosciences, Biotechnology and Biopharmaceutics, University of Bari, Bari, BA, Italy.
Leonardo BrunoDepartment of Biology, Ecology and Earth Science, University of Calabria, Arcavacata di Rende, CS, Italy. leonardo.bruno@unical.it.
Maria Beatrice BitontiDepartment of Biology, Ecology and Earth Science, University of Calabria, Arcavacata di Rende, CS, Italy.
University of Calabria · ITUniversity of Pisa · ITUniversity of Bari Aldo Moro · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA methylation plays an important role in modulating plant growth plasticity in response to stress, but mechanisms involved in such control need further investigation. We used drm1 drm2 cmt3 mutant of Arabidopsis thaliana, defective in DNA methylation, to explore metabolic pathways downstream epigenetic modulation under cadmium (Cd) stress. To this aim, a transcriptomic analysis was performed on ddc and WT plants exposed to a long-lasting (21 d) Cd treatment (25/50 µM), focusing on hormone genetic pathways. Growth parameters and hormones amount were also estimated. Transcriptomic data and hormone quantification showed that, under prolonged Cd treatment, level and signalling of growth-sustaining hormones (auxins, CKs, GAs) were enhanced and/or maintained, while a decrease was detected for stress-related hormones (JA, ABA, SA), likely as a strategy to avoid the side effects of their long-lasting activation. Such picture was more effective in ddc than WT, already at 25 µM Cd, in line with its better growth performance. A tight relationship between methylation status and the modulation of hormone genetic pathways under Cd stress was assessed. We propose that the higher genome plasticity conferred to ddc by DNA hypomethylated status underlies its prompt response to modulate hormones genetic pathways and activity and assure a flexible growth.

Indexed as

ArabidopsisArabidopsis ProteinsBase SequenceCadmiumCytokininsDNA-Cytosine MethylasesDNA MethylationDNA, PlantGene Expression Regulation, PlantGenes, PlantMethyltransferasesMutationPlant Growth RegulatorsPlant RootsRNA, MessengerRNA, PlantArabidopsis ProteinsCadmiumCMT3 protein, ArabidopsisCytokininsDNA-Cytosine MethylasesDNA, PlantDRM1 protein, ArabidopsisDRM2 protein, ArabidopsisMethyltransferasesPlant Growth RegulatorsRNA, MessengerRNA, PlantSoil Pollutants

Identifiers

PMID34040101
PMCPMC8154917
OpenAlexW3164476520

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.