Evidence map›Paper›PMID 34038426›Full record

ArticlePloS one2021

Machine learning to extract muscle fascicle length changes from dynamic ultrasound images in real-time.

Luis G Rosa, Jonathan S Zia, Omer T Inan, Gregory S Sawicki

Abstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Observational
  8. Article
  9. Improved Fascicle Length Estimates From Ultrasound Using a U-net-LSTM Framework.IEEE ... International Conference on Rehabilitation Robotics : [proceedings] · 2023
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Untethered muscle tracking using magnetomicrometry.Frontiers in bioengineering and biotechnology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Luis G RosaSchool of Mechanical Engineering, Georgia Institute of Technology, Atlanta, Georgia, United States of America.ORCID 0000-0002-9879-2223
Jonathan S ZiaSchool of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, Georgia, United States of America.
Omer T InanSchool of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, Georgia, United States of America.
Gregory S SawickiSchool of Mechanical Engineering, Georgia Institute of Technology, Atlanta, Georgia, United States of America.

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008169 · NIGMS · EMORY UNIVERSITY · PI GROSS, ROBERT E · 1987 to 2021
$20.3M
Wearable lung sounds, fluid, and body temperature monitoring for patients with COVID-19R01EB023808 · NIBIB · GEORGIA INSTITUTE OF TECHNOLOGY · PI INAN, OMER TOLGA · 2016 to 2020
$2.2M
Dynamic imaging to guide wearable robotic intervention for enhanced mobility in agingR01AG058615 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI FRANZ, JASON R, SAWICKI, GREGORY STEPHEN · 2018 to 2022
$1.8M
NIA NIH HHS R01 AG058615NIBIB NIH HHS R01 EB023808NIEHS NIH HHS 27303C0140NIGMS NIH HHS T32 GM008169
6 · The paper itself

Abstract

BACKGROUND AND

objectiveDynamic muscle fascicle length measurements through B-mode ultrasound have become popular for the non-invasive physiological insights they provide regarding musculoskeletal structure-function. However, current practices typically require time consuming post-processing to track muscle length changes from B-mode images. A real-time measurement tool would not only save processing time but would also help pave the way toward closed-loop applications based on feedback signals driven by in vivo muscle length change patterns. In this paper, we benchmark an approach that combines traditional machine learning (ML) models with B-mode ultrasound recordings to obtain muscle fascicle length changes in real-time. To gauge the utility of this framework for 'in-the-loop' applications, we evaluate accuracy of the extracted muscle length change signals against time-series' derived from a standard, post-hoc automated tracking algorithm.

methodsWe collected B-mode ultrasound data from the soleus muscle of six participants performing five defined ankle motion tasks: (a) seated, constrained ankle plantarflexion, (b) seated, free ankle dorsi/plantarflexion, (c) weight-bearing, calf raises (d) walking, and then a (e) mix. We trained machine learning (ML) models by pairing muscle fascicle lengths obtained from standardized automated tracking software (UltraTrack) with the respective B-mode ultrasound image input to the tracker, frame-by-frame. Then we conducted hyperparameter optimizations for five different ML models using a grid search to find the best performing parameters for a combination of high correlation and low RMSE between ML and UltraTrack processed muscle fascicle length trajectories. Finally, using the global best model/hyperparameter settings, we comprehensively evaluated training-testing outcomes within subject (i.e., train and test on same subject), cross subject (i.e., train on one subject, test on another) and within/direct cross task (i.e., train and test on same subject, but different task).

resultsSupport vector machine (SVM) was the best performing model with an average r = 0.70 ±0.34 and average RMSE = 2.86 ±2.55 mm across all direct training conditions and average r = 0.65 ±0.35 and average RMSE = 3.28 ±2.64 mm when optimized for all cross-participant conditions. Comparisons between ML vs. UltraTrack (i.e., ground truth) tracked muscle fascicle length versus time data indicated that ML tracked images reliably capture the salient qualitative features in ground truth length change data, even when correlation values are on the lower end. Furthermore, in the direct training, calf raises condition, which is most comparable to previous studies validating automated tracking performance during isolated contractions on a dynamometer, our ML approach yielded 0.90 average correlation, in line with other accepted tracking methods in the field.

conclusionsBy combining B-mode ultrasound and classical ML models, we demonstrate it is possible to achieve real-time tracking of human soleus muscle fascicles across a number of functionally relevant contractile conditions. This novel sensing modality paves the way for muscle physiology in-the-loop applications that could be used to modify gait via biofeedback or unlock novel wearable device control techniques that could enable restored or augmented locomotion performance.

Indexed as

AdultAlgorithmsAnkleAnkle JointFasciculationFemaleGaitHumansLocomotionMachine LearningMaleMuscle ContractionMuscle, SkeletalSoftwareUltrasonographyWalking

Identifiers

PMID34038426
PMCPMC8153491

What OpenQuestion holds

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LicenceCC0
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.