Evidence map›Paper›PMID 34037840›Full record

ReviewApplied microbiology and biotechnology2021

Engineering of the unfolded protein response pathway in Pichia pastoris: enhancing production of secreted recombinant proteins.

Hana Raschmanová, Astrid Weninger, Zdeněk Knejzlík, Karel Melzoch, Karin Kovar

Abstract readReview
In one paragraph

Review in Applied microbiology and biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Metabolic engineering ofApplied and environmental microbiology · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. EstablishingBiodesign research · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Potential of a constitutive-UPR and histone deacetylase A-deficientApplied and environmental microbiology · 2025
    Article
  14. Synthetic and systems biotechnology · 2025
    Article
  15. Article
  16. Review
  17. Structural Homology Fails to Predict Secretion Efficiency inInternational journal of molecular sciences · 2025
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hana RaschmanováDepartment of Biotechnology, University of Chemistry and Technology Prague, Prague, Czech Republic. hanaraschman@gmail.com.ORCID http://orcid.org/0000-0003-3871-081X
Astrid WeningerInstitute of Molecular Biotechnology, Graz University of Technology, Graz, Austria.
Zdeněk KnejzlíkInstitute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.
Karel MelzochDepartment of Biotechnology, University of Chemistry and Technology Prague, Prague, Czech Republic.
Karin KovarInstitute of Chemistry and Biotechnology, Zurich University of Applied Sciences ZHAW, Wädenswil, Switzerland.

Funding

Ministerstvo Školství, Mládeže a Tělovýchovy 21-SVV/2018
6 · The paper itself

Abstract

Folding and processing of proteins in the endoplasmic reticulum (ER) are major impediments in the production and secretion of proteins from Pichia pastoris (Komagataella sp.). Overexpression of recombinant genes can overwhelm the innate secretory machinery of the P. pastoris cell, and incorrectly folded proteins may accumulate inside the ER. To restore proper protein folding, the cell naturally triggers an unfolded protein response (UPR) pathway, which upregulates the expression of genes coding for chaperones and other folding-assisting proteins (e.g., Kar2p, Pdi1, Ero1p) via the transcription activator Hac1p. Unfolded/misfolded proteins that cannot be repaired are degraded via the ER-associated degradation (ERAD) pathway, which decreases productivity. Co-expression of selected UPR genes, along with the recombinant gene of interest, is a common approach to enhance the production of properly folded, secreted proteins. Such an approach, however, is not always successful and sometimes, protein productivity decreases because of an unbalanced UPR. This review summarizes successful chaperone co-expression strategies in P. pastoris that are specifically related to overproduction of foreign proteins and the UPR. In addition, it illustrates possible negative effects on the cell's physiology and productivity resulting from genetic engineering of the UPR pathway. We have focused on Pichia's potential for commercial production of valuable proteins and we aim to optimize molecular designs so that production strains can be tailored to suit a specific heterologous product. KEY POINTS: • Chaperones co-expressed with recombinant genes affect productivity in P. pastoris. • Enhanced UPR may impair strain physiology and promote protein degradation. • Gene copy number of the target gene and the chaperone determine the secretion rate.

Indexed as

Fungal ProteinsPichiaRecombinant ProteinsSaccharomycetalesUnfolded Protein ResponseFungal ProteinsRecombinant ProteinsChaperoneCo-expression strategyFolding and secretionPichia pastorisProductivity of recombinant protein productionUnfolded protein response (UPR)

Identifiers

PMID34037840
PMCPMC8195892

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.