Evidence map›Paper›PMID 34036344›Full record

ArticleBlood2021

Impairment of human terminal erythroid differentiation by histone deacetylase 5 deficiency.

Yaomei Wang, Wei Li, Vincent P Schulz, Huizhi Zhao, Xiaoli Qu, Qian Qi, Yong Cheng, Xinhua Guo, Shijie Zhang, Xin Wei and 7 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Blood, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  10. Macrophages in Hematopoiesis and Related Blood Diseases.Genomics, proteomics & bioinformatics · 2025
    Review
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  17. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Yaomei WangSchool of Life Sciences, Zhengzhou University, Zhengzhou, China.
Wei LiSchool of Life Sciences, Zhengzhou University, Zhengzhou, China.
Vincent P SchulzDepartment of Pediatrics, Yale University, New Haven, CT.
Huizhi ZhaoSchool of Life Sciences, Zhengzhou University, Zhengzhou, China.
Xiaoli QuSchool of Life Sciences, Zhengzhou University, Zhengzhou, China.
Qian QiDepartment of Hematology, St. Jude Children's Research Hospital, Memphis, TN.
Yong ChengDepartment of Hematology, St. Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0002-9314-0971
Xinhua GuoLaboratory of Membrane Biology, New York Blood Center, New York, NY.
Shijie ZhangSchool of Life Sciences, Zhengzhou University, Zhengzhou, China.
Xin WeiLaboratory of Membrane Biology, New York Blood Center, New York, NY.
Donghao LiuSchool of Life Sciences, Zhengzhou University, Zhengzhou, China.
Karina YazdanbakhshLaboratory of Complement Biology and.
Christopher D HillyerRed Cell Physiology Laboratory, New York Blood Center, New York, NY; and.
Narla MohandasRed Cell Physiology Laboratory, New York Blood Center, New York, NY; and.ORCID 0000-0003-2271-5296
Lixiang ChenSchool of Life Sciences, Zhengzhou University, Zhengzhou, China.ORCID 0000-0001-7785-2496
Patrick G GallagherDepartment of Pediatrics, Yale University, New Haven, CT.
Xiuli AnLaboratory of Membrane Biology, New York Blood Center, New York, NY.
New York Blood Center · USZhengzhou University · CNSt. Jude Children's Research Hospital · USYale University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
YEAST MEMBRANE CYTOSKELETONP01DK032094 · NIDDK · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI NARLA, MOHANDAS · 1987 to 2021
$26.7M
Sickle cell bone marrow niche and regulation of platelet activation and erythropoiesisP01HL149626 · NHLBI · NEW YORK BLOOD CENTER · PI Karina Yazdanbakhsh · 2020 to 2026
$24.4M
Use of forward Genetic approaches to identify Babesia receptorsR01HL140625 · NHLBI · NEW YORK BLOOD CENTER · PI AN, XIULI, LOBO, CHERYL ANN · 2018 to 2021
$2.8M
NCATS NIH HHS UL1 TR001863NHLBI NIH HHS P01 HL149626NHLBI NIH HHS R01 HL140625NIDDK NIH HHS P01 DK032094
6 · The paper itself

Abstract

Histone deacetylases (HDACs) are a group of enzymes that catalyze the removal of acetyl groups from histone and nonhistone proteins. HDACs have been shown to have diverse functions in a wide range of biological processes. However, their roles in mammalian erythropoiesis remain to be fully defined. This study showed that, of the 11 classic HDAC family members, 6 (HDAC1, -2, -3, and HDAC5, -6, -7) are expressed in human erythroid cells, with HDAC5 most significantly upregulated during terminal erythroid differentiation. Knockdown of HDAC5 by either short hairpin RNA or small interfering RNA in human CD34+ cells followed by erythroid cell culture led to increased apoptosis, decreased chromatin condensation, and impaired enucleation of erythroblasts. Biochemical analyses revealed that HDAC5 deficiency resulted in activation of p53 in association with increased acetylation of p53. Furthermore, although acetylation of histone 4 (H4) is decreased during normal terminal erythroid differentiation, HDAC5 deficiency led to increased acetylation of H4 (K12) in late-stage erythroblasts. This increased acetylation was accompanied by decreased chromatin condensation, implying a role for H4 (K12) deacetylation in chromatin condensation. ATAC-seq and RNA sequencing analyses revealed that HDAC5 knockdown leads to increased chromatin accessibility genome-wide and global changes in gene expression. Moreover, pharmacological inhibition of HDAC5 by the inhibitor LMK235 also led to increased H4 acetylation, impaired chromatin condensation, and enucleation. Taken together, our findings have uncovered previously unrecognized roles and molecular mechanisms of action for HDAC5 in human erythropoiesis. These results may provide insights into understanding the anemia associated with HDAC inhibitor treatment.

Indexed as

ErythropoiesisApoptosisErythroblastsErythroid CellsHistone DeacetylasesHumansRNA InterferenceRNA, Small InterferingUp-RegulationHDAC5 protein, humanHistone DeacetylasesRNA, Small Interfering

Identifiers

PMID34036344
PMCPMC8554652
OpenAlexW3165768690

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.