ArticleBMC genomics2021
De novo transcriptome sequencing and anthocyanin metabolite analysis reveals leaf color of Acer pseudosieboldianum in autumn.
Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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18 citing papers in PubMed, 33 citations in OpenAlex.
- Analysis of Pigmentation Changes in Bracts ofBiology · 2025Article
- Metabolome and transcriptome based investigation of anthocyanin accumulation in black wolfberry (Lycium ruthenicum) and validation of the function of LrUFGT.BMC plant biology · 2025Article
- cDNA Cloning, Bioinformatics, and Expression Analysis ofInternational journal of molecular sciences · 2025Article
- Transcriptome sequencing and anthocyanin metabolite analysis involved in leaf red color formation of Cinnamomum camphora.Scientific reports · 2024Article
- Molecular mechanism of flower colour formation inAoB PLANTS · 2024Article
- Integrative metabolome and transcriptome analyses reveal the coloration mechanism in Camellia oleifera petals with different color.BMC plant biology · 2024Article
- Preliminary establishment of genetic transformation system for embryogenic callus ofFrontiers in plant science · 2024Article
- Genome-Wide Analysis of the bHLH Gene Family inPlants (Basel, Switzerland) · 2023Article
- Transcriptomic analysis reveals the mechanism underlying the anthocyanin changes in Fragaria nilgerrensis Schlecht. and its interspecific hybrids.BMC plant biology · 2023Article
- Cyanidin-3-O-glucoside Contributes to Leaf Color Change by Regulating TwoInternational journal of molecular sciences · 2023Article
- Investigation of the Key Genes Associated with Anthocyanin Accumulation during Inner Leaf Reddening in Ornamental Kale (International journal of molecular sciences · 2023Article
- Identification and Analysis of theInternational journal of molecular sciences · 2023Article
- Transcriptome and metabolome analyses reveal molecular mechanisms of anthocyanin-related leaf color variation in poplar (Frontiers in plant science · 2023Article
- Transcriptomics Profiling ofInternational journal of molecular sciences · 2022Article
- Integrated transcriptome and metabolome profiling ofFrontiers in genetics · 2022Article
- Integrating Transcriptomic and Metabolomic Analyses to Explore the Effect of Color Under Fruit Calyx on That of Fruit Apex in Eggplant (Frontiers in genetics · 2022Article
- Chromosome-Level Genome Assembly forFrontiers in plant science · 2022Article
- Combined transcriptome and metabolome integrated analysis of Acer mandshuricum to reveal candidate genes involved in anthocyanin accumulation.Scientific reports · 2021Article
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7 authors at 1 institution in 1 country.
Funding
Abstract
backgroundLeaf color is an important ornamental trait of colored-leaf plants. The change of leaf color is closely related to the synthesis and accumulation of anthocyanins in leaves. Acer pseudosieboldianum is a colored-leaf tree native to Northeastern China, however, there was less knowledge in Acer about anthocyanins biosynthesis and many steps of the pathway remain unknown to date.
resultsAnthocyanins metabolite and transcript profiling were conducted using HPLC and ESI-MS/MS system and high-throughput RNA sequencing respectively. The results demonstrated that five anthocyanins were detected in this experiment. It is worth mentioning that Peonidin O-hexoside and Cyanidin 3, 5-O-diglucoside were abundant, especially Cyanidin 3, 5-O-diglucoside displayed significant differences in content change at two periods, meaning it may be play an important role for the final color. Transcriptome identification showed that a total of 67.47 Gb of clean data were obtained from our sequencing results. Functional annotation of unigenes, including comparison with COG and GO databases, yielded 35,316 unigene annotations. 16,521 differentially expressed genes were identified from a statistical analysis of differentially gene expression. The genes related to leaf color formation including PAL, ANS, DFR, F3H were selected. Also, we screened out the regulatory genes such as MYB, bHLH and WD40. Combined with the detection of metabolites, the gene pathways related to anthocyanin synthesis were analyzed.
conclusionsCyanidin 3, 5-O-diglucoside played an important role for the final color. The genes related to leaf color formation including PAL, ANS, DFR, F3H and regulatory genes such as MYB, bHLH and WD40 were selected. This study enriched the available transcriptome information for A. pseudosieboldianum and identified a series of differentially expressed genes related to leaf color, which provides valuable information for further study on the genetic mechanism of leaf color expression in A. pseudosieboldianum.
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