Evidence map›Paper›PMID 34032995›Full record

ArticleCell biochemistry and biophysics2021

USP13 Deficiency Aggravates Cigarette-smoke-induced Alveolar Space Enlargement.

Alyssa D Gregory, Kevin C Tran, Arya S Tamaskar, Jianxin Wei, Jing Zhao, Yutong Zhao

Open access · greenAbstract read
In one paragraph

Article in Cell biochemistry and biophysics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Alyssa D Gregory *Department of Medicine, The University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Kevin C Tran *Department of Physiology and Cell Biology, The Ohio State University Wexner Medical Center, Columbus, OH, USA.
Arya S Tamaskar *Department of Physiology and Cell Biology, The Ohio State University Wexner Medical Center, Columbus, OH, USA.
Jianxin WeiDepartment of Medicine, The University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Jing ZhaoDepartment of Physiology and Cell Biology, The Ohio State University Wexner Medical Center, Columbus, OH, USA.
Yutong ZhaoDepartment of Physiology and Cell Biology, The Ohio State University Wexner Medical Center, Columbus, OH, USA. yutong.zhao@osumc.edu.ORCID http://orcid.org/0000-0001-6604-9315
The Ohio State University Wexner Medical Center · USUniversity of Pittsburgh · US

Funding

ISGylation regulates lung endothelial inflammationR01HL157164 · NHLBI · OHIO STATE UNIVERSITY · PI ZHAO, YUTONG · 2021 to 2024
$2.2M
Lysophosphatidic Acid in Airway Barrier Function and RemodelingR01HL091916 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ZHAO, YUTONG · 2009 to 2013
$1.8M
Molecular regulation of anti-inflammatory cytokine receptor in sepsisR01HL136294 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ZHAO, YUTONG · 2018 to 2021
$1.8M
Deubiquitinating and inhibiting Hsp90 by USP40 mitigates lung injuryR01HL151513 · NHLBI · OHIO STATE UNIVERSITY · PI ZHAO, JING · 2020 to 2023
$1.7M
Regulation of proteolysis by deubiquiting enzyme in lung inflammatory diseaseR01HL131665 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ZHAO, YUTONG · 2017 to 2020
$1.5M
Regulation of Histone Acetyltransferase Stability In SepsisR01GM115389 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ZHAO, JING · 2015 to 2019
$1.5M
Regulation of the IL-33 receptor, ST2L, by Protein Stability in Septic InjuryR01HL112791 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ZHAO, YUTONG · 2013 to 2016
$1.5M
Foundation for the National Institutes of Health R01Hl131665NHLBI NIH HHS R01 HL091916NHLBI NIH HHS R01 HL112791NHLBI NIH HHS R01 HL131665NHLBI NIH HHS R01 HL136294NHLBI NIH HHS R01 HL151513NHLBI NIH HHS R01 HL157164NIGMS NIH HHS R01 GM115389
6 · The paper itself

Abstract

Alveolar enlargement is a pathological feature of emphysema. Long-term exposure to cigarette smoke (CS) is a high-risk factor for the development of emphysema. Abnormal protein ubiquitination has been implicated to regulate the development of human disorders, however, the role of protein ubiquitination in emphysema has not been well-studied. In this study, we attempted to investigate if a deubiquitinase, USP13, regulates the development of emphysema. Under a mild CS exposure condition, USP13-deficient mice show significant increases in alveolar chord length, indicating that USP13-deficient mice are susceptible to CS-induced alveolar enlargement. It has been shown that USP13 knockout reduced fibronectin expression in lungs. Here, we found that collagen levels were reduced in USP13 siRNA-transfected lung fibroblast cells. This suggests that a loss of extracellular matrix in connective tissues contributes to alveolar enlargement in USP13-deficient mice in response to CS exposure. Further, we investigated the role of USP13 in the expression of oxidative stress markers TXNIP and HMOX1. An increase in HMOX1 abundance was observed in USP13 knockdown lung fibroblast and epithelial cells. Overexpression of USP13 reduced HMOX1 protein levels in lung fibroblast cells, suggesting that modulation of USP13 levels may affect oxidative stress. Knockdown of USP13 significantly reduced TXNIP levels in lungs or lung fibroblast cells. A protein stability pulse-chase assay showed that TXNIP is instable within USP13 knockdown lung fibroblast cells. Further, the reduction of TXNIP was observed in USP13 inhibitor-treated lung epithelial cells. USP13-deficient mice also show higher levels of IgG in bronchoalveolar lavage fluid. This study provides evidence showing that USP13 deficiency plays a role in alveolar space enlargement.

Identifiers

PMID34032995
PMCPMC8887808
OpenAlexW3164306272

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.