Evidence map›Paper›PMID 34031124›Full record

ArticleInfection and immunity2021

A Tn-seq Screen of Streptococcus pneumoniae Uncovers DNA Repair as the Major Pathway for Desiccation Tolerance and Transmission.

Allison J Matthews, Hannah M Rowe, Jason W Rosch, Andrew Camilli

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
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  4. Uncommon pathogen, common activity:Frontiers in public health · 2026
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  5. Gene dependence during mammalianMicrobial genomics · 2025
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  6. Mechanisms of bacterial host-to-host transmission.Microbiology and molecular biology reviews : MMBR · 2025
    Review
  7. Review
  8. Biological puzzles solved by usingJournal of bacteriology · 2024
    Review
  9. Review
  10. Identification ofJournal of bacteriology · 2023
    Article
  11. Article
  12. Article
  13. Metabolomics-based response ofFrontiers in microbiology · 2023
    Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Allison J MatthewsDepartment of Molecular Biology, Tufts University School of Medicine, Boston, Massachusetts, USA.
Hannah M RoweDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee, USA.
Jason W RoschDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee, USA.
Andrew CamilliDepartment of Molecular Biology, Tufts University School of Medicine, Boston, Massachusetts, USA.
St. Jude Children's Research Hospital · USTufts University · US

Funding

MOLECULAR ANALYSIS OF MICROBIAL PATHOGENST32AI007422 · NIAID · TUFTS UNIVERSITY BOSTON · PI Ralph R. Isberg · 1992 to 2026
$5.7M
Characterization: Papillomavirus Regulatory ProteinsZ01AI000713 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI MCBRIDE, ALISON · 1994 to 2008
$1.4M
Intramural NIH HHS Z01 AI000713NIAID NIH HHS T32 AI007422
6 · The paper itself

Abstract

Streptococcus pneumoniae is an opportunistic pathogen that is a common cause of serious invasive diseases such as pneumonia, bacteremia, meningitis, and otitis media. Transmission of this bacterium has classically been thought to occur through inhalation of respiratory droplets and direct contact with nasal secretions. However, the demonstration that S. pneumoniae is desiccation tolerant and, therefore, environmentally stable for extended periods of time opens up the possibility that this pathogen is also transmitted via contaminated surfaces (fomites). To better understand the molecular mechanisms that enable S. pneumoniae to survive periods of desiccation, we performed a high-throughput transposon sequencing (Tn-seq) screen in search of genetic determinants of desiccation tolerance. We identified 42 genes whose disruption reduced desiccation tolerance and 45 genes that enhanced desiccation tolerance. The nucleotide excision repair pathway was the most enriched category in our Tn-seq results, and we found that additional DNA repair pathways are required for desiccation tolerance, demonstrating the importance of maintaining genome integrity after desiccation. Deletion of the nucleotide excision repair gene

Indexed as

DNA RepairDNA Transposable ElementsAdaptation, BiologicalAnimalsDisease SusceptibilityHost-Pathogen InteractionsMicePneumococcal InfectionsSignal TransductionStreptococcus pneumoniaeDNA Transposable Elementsdesiccationdesiccation toleranceDNA repairfomitefomite transmissionnucleotide excision repairpneumococciStreptococcus pneumoniaetransmissionuvrAxerotolerance

Identifiers

PMID34031124
PMCPMC8281258
OpenAlexW3165492495

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.