Evidence map›Paper›PMID 34030677›Full record

ArticleBMC medical genomics2021

Extremes of age are associated with differences in the expression of selected pattern recognition receptor genes and ACE2, the receptor for SARS-CoV-2: implications for the epidemiology of COVID-19 disease.

Stephen W Bickler, David M Cauvi, Kathleen M Fisch, James M Prieto, Alicia G Sykes, Hariharan Thangarajah, David A Lazar, Romeo C Ignacio, Dale R Gerstmann, Allen F Ryan and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC medical genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
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  14. Genophenotypic Factors and Pharmacogenomics in Adverse Drug Reactions.International journal of molecular sciences · 2021
    Review
  15. Skin Aging, Cellular Senescence and Natural Polyphenols.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Stephen W BicklerRady Children's Hospital, Rady Children's Hospital, University of California San Diego, 3030 Children's Way, San Diego, CA, 92123, USA. sbickler@health.ucsd.edu.ORCID 0000-0003-2626-2407
David M CauviDepartment of Surgery, University of California San Diego, La Jolla, CA, USA.
Kathleen M FischCenter for Computational Biology and Bioinformatics, University of California San Diego, La Jolla, CA, USA.
James M PrietoRady Children's Hospital, Rady Children's Hospital, University of California San Diego, 3030 Children's Way, San Diego, CA, 92123, USA.
Alicia G SykesRady Children's Hospital, Rady Children's Hospital, University of California San Diego, 3030 Children's Way, San Diego, CA, 92123, USA.
Hariharan ThangarajahRady Children's Hospital, Rady Children's Hospital, University of California San Diego, 3030 Children's Way, San Diego, CA, 92123, USA.
David A LazarRady Children's Hospital, Rady Children's Hospital, University of California San Diego, 3030 Children's Way, San Diego, CA, 92123, USA.
Romeo C IgnacioRady Children's Hospital, Rady Children's Hospital, University of California San Diego, 3030 Children's Way, San Diego, CA, 92123, USA.
Dale R GerstmannTimpanogos Regional Hospital, Orem, UT, USA.
Allen F RyanDepartment of Surgery, University of California San Diego, La Jolla, CA, USA.
Philip E BicklerDepartment of Anesthesia, University of California San Francisco, San Francisco, CA, USA.
Antonio De MaioDepartment of Surgery, University of California San Diego, La Jolla, CA, USA.
University of California San Diego · USNaval Medical Center San Diego · USUC San Diego Health System · USUniversity of California, San Francisco · US

Funding

Middle ear responses in Otitis MediaR01DC000129 · NIDCD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RYAN, ALLEN F. · 1989 to 2021
$6.8M
Innovative therapy for diseases of the middle earR01DC012595 · NIDCD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI RYAN, ALLEN F. · 2012 to 2023
$3.3M
Basic Mechanisms on Hearing Loss of Cochlear OriginI01BX001205 · VA · VA SAN DIEGO HEALTHCARE SYSTEM · PI RYAN, ALLEN F. · 2013 to 2024
–
BLRD VA I01 BX001205NIDCD NIH HHS R01 DC000129NIDCD NIH HHS R01 DC012595
6 · The paper itself

Abstract

backgroundOlder aged adults and those with pre-existing conditions are at highest risk for severe COVID-19 associated outcomes.

methodsUsing a large dataset of genome-wide RNA-seq profiles derived from human dermal fibroblasts (GSE113957) we investigated whether age affects the expression of pattern recognition receptor (PRR) genes and ACE2, the receptor for SARS-CoV-2.

resultsExtremes of age are associated with increased expression of selected PRR genes, ACE2 and four genes that encode proteins that have been shown to interact with SAR2-CoV-2 proteins.

conclusionsAssessment of PRR expression might provide a strategy for stratifying the risk of severe COVID-19 disease at both the individual and population levels.

Indexed as

Gene Expression RegulationAdolescentAdultAgedAged, 80 and overAge FactorsChildCOVID-19DermisFibroblastsGene Expression ProfilingHumansMiddle AgedPeptidyl-Dipeptidase AReceptors, Pattern RecognitionReceptors, VirusPeptidyl-Dipeptidase AReceptors, Pattern RecognitionReceptors, VirusAgingPattern recognition receptorsSARS-CoV-2Skin fibroblastsToll-like receptor 4

Identifiers

PMID34030677
PMCPMC8142073
OpenAlexW3164177170

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.