Evidence map›Paper›PMID 34030582›Full record

ArticleGut microbes

Mapping the colorectal tumor microbiota.

C L Murphy, M Barrett, P Pellanda, S Killeen, M McCourt, E Andrews, M O' Riordain, F Shanahan, Pw O'Toole

Abstract read
In one paragraph

Article in Gut microbes. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Intestinal dysbiosis and colorectal cancer.Chinese medical journal · 2025
    Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Association of Gut Microbiota With Intestinal Ischemia/Reperfusion Injury.Frontiers in cellular and infection microbiology · 2022
    Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

C L MurphyAPC Microbiome Ireland, University College Cork, National University of Ireland, Cork, Ireland.
M BarrettAPC Microbiome Ireland, University College Cork, National University of Ireland, Cork, Ireland.
P PellandaAPC Microbiome Ireland, University College Cork, National University of Ireland, Cork, Ireland.
S KilleenDepartment of Colorectal Surgery, Mercy University Hospital, Cork, Ireland.
M McCourtDepartment of Colorectal Surgery, Cork University Hospital, Cork, Ireland.
E AndrewsDepartment of Colorectal Surgery, Cork University Hospital, Cork, Ireland.
M O' RiordainAPC Microbiome Ireland, University College Cork, National University of Ireland, Cork, Ireland.ORCID 0000-0003-4567-0158
F ShanahanAPC Microbiome Ireland, University College Cork, National University of Ireland, Cork, Ireland.
Pw O'TooleAPC Microbiome Ireland, University College Cork, National University of Ireland, Cork, Ireland.ORCID 0000-0001-5377-0824

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gut microbiome in patients with colorectal cancer (CRC) is different than that of healthy controls. Previous studies have profiled the CRC tumor microbiome using a single biopsy. However, since the morphology and cellular subtype vary significantly within an individual tumor, the possibility of sampling error arises for the microbiome within an individual tumor. To test this hypothesis, seven biopsies were taken from representative areas on and off the tumor in five patients with CRC. The microbiome composition was strikingly similar across all samples from an individual. The variation in microbiome alpha-diversity was significantly greater between individuals' samples then within individuals. This is the first study, to our knowledge, that shows that the microbiome of an individual tumor is spatially homogeneous. Our finding strengthens the assumption that a single biopsy is representative of the entire tumor, and that microbiota changes are not limited to a specific area of the neoplasm.

Indexed as

Gastrointestinal MicrobiomeAgedBacteriaBiopsyColonColorectal NeoplasmsFemaleHumansMaleMiddle AgedPhylogenycancerColorectalgutmicrobiometumor

Identifiers

PMID34030582
PMCPMC8158024

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.