Evidence map›Paper›PMID 34029312›Full record

ArticlePLoS computational biology2021

Calculation of the force field required for nucleus deformation during cell migration through constrictions.

Ian D Estabrook, Hawa Racine Thiam, Matthieu Piel, Rhoda J Hawkins

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In one paragraph

Article in PLoS computational biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ian D EstabrookDepartment of Physics and Astronomy, University of Sheffield, Sheffield, United Kingdom.ORCID 0000-0002-3241-6890
Hawa Racine ThiamInstitut Curie, PSL Research University, CNRS, UMR 144, Paris, France.ORCID 0000-0002-2381-1442
Matthieu PielInstitut Curie, PSL Research University, CNRS, UMR 144, Paris, France.
Rhoda J HawkinsDepartment of Physics and Astronomy, University of Sheffield, Sheffield, United Kingdom.ORCID 0000-0002-9027-7622

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During cell migration in confinement, the nucleus has to deform for a cell to pass through small constrictions. Such nuclear deformations require significant forces. A direct experimental measure of the deformation force field is extremely challenging. However, experimental images of nuclear shape are relatively easy to obtain. Therefore, here we present a method to calculate predictions of the deformation force field based purely on analysis of experimental images of nuclei before and after deformation. Such an inverse calculation is technically non-trivial and relies on a mechanical model for the nucleus. Here we compare two simple continuum elastic models of a cell nucleus undergoing deformation. In the first, we treat the nucleus as a homogeneous elastic solid and, in the second, as an elastic shell. For each of these models we calculate the force field required to produce the deformation given by experimental images of nuclei in dendritic cells migrating in microchannels with constrictions of controlled dimensions. These microfabricated channels provide a simplified confined environment mimicking that experienced by cells in tissues. Our calculations predict the forces felt by a deforming nucleus as a migrating cell encounters a constriction. Since a direct experimental measure of the deformation force field is very challenging and has not yet been achieved, our numerical approaches can make important predictions motivating further experiments, even though all the parameters are not yet available. We demonstrate the power of our method by showing how it predicts lateral forces corresponding to actin polymerisation around the nucleus, providing evidence for actin generated forces squeezing the sides of the nucleus as it enters a constriction. In addition, the algorithm we have developed could be adapted to analyse experimental images of deformation in other situations.

Indexed as

Models, BiologicalActinsAlgorithmsAnimalsBiomechanical PhenomenaCell MovementCell NucleusCell ShapeComputational BiologyComputer SimulationDendritic CellsElasticityMiceMicrotechnologyTime-Lapse ImagingActins

Identifiers

PMID34029312
PMCPMC8177636

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.