Evidence map›Paper›PMID 34026045›Full record

ArticleF1000Research2021

Most Japanese individuals are genetically predisposed to recognize an immunogenic protein fragment shared between COVID-19 and common cold coronaviruses.

Johannes M Dijkstra, Aaron P Frenette, Brian Dixon

Open access · goldAbstract read
In one paragraph

Article in F1000Research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Human genetic basis of coronavirus disease 2019.Signal transduction and targeted therapy · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Johannes M DijkstraInstitute for Comprehensive Medical Science, Fujita Health Universit, Toyoake-shi, 470-1192, Japan.ORCID 0000-0001-7097-3826
Aaron P FrenetteDepartment of Biology, University of Waterlo, Waterloo, ON, N2L 3G1, Canada.
Brian DixonDepartment of Biology, University of Waterlo, Waterloo, ON, N2L 3G1, Canada.ORCID 0000-0003-4213-5483
University of Waterloo · CAFujita Health University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the spring of 2020, we and others hypothesized that T cells in COVID-19 patients may recognize identical protein fragments shared between the coronaviruses of the common cold and COVID-19 and thereby confer cross-virus immune memory. Here, we look at this issue by screening studies that, since that time, have experimentally addressed COVID-19 associated T cell specificities. Currently, the identical T cell epitope shared between COVID-19 and common cold coronaviruses most convincingly identified as immunogenic is the CD8

Indexed as

Common ColdCOVID-19Epitopes, T-LymphocyteHumansJapanSARS-CoV-2Epitopes, T-LymphocyteCOVID-19epitopeHLAJapaneseMHCpeptideSPRWYFYYLT cellVYIGDPAQL

Identifiers

PMID34026045
PMCPMC8108557
OpenAlexW3135052037

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.