Evidence map›Paper›PMID 34023904›Full record

ArticleNucleic acids research2021

SANS (USH1G) regulates pre-mRNA splicing by mediating the intra-nuclear transfer of tri-snRNP complexes.

Adem Yildirim, Sina Mozaffari-Jovin, Ann-Kathrin Wallisch, Jessica Schäfer, Sebastian E J Ludwig, Henning Urlaub, Reinhard Lührmann, Uwe Wolfrum

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact, top 89% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 citations in OpenAlex.

  1. Review
  2. Review
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  4. Review
  5. Article
  6. Pathogenic Variants inInternational journal of molecular sciences · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. The Usher syndrome 1C protein harmonin regulates canonical Wnt signaling.Frontiers in cell and developmental biology · 2023
    Article
  11. Article
  12. Alternative splicing in shaping the molecular landscape of the cochlea.Frontiers in cell and developmental biology · 2023
    Review
  13. Article
  14. Article
  15. Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Adem YildirimMolecular Cell Biology, Institute of Molecular Physiology, Johannes Gutenberg-University of Mainz, Germany.
Sina Mozaffari-JovinDepartment of Cellular Biochemistry, Max-Planck-Institute for Biophysical Chemistry, Goettingen, Germany.
Ann-Kathrin WallischMolecular Cell Biology, Institute of Molecular Physiology, Johannes Gutenberg-University of Mainz, Germany.
Jessica SchäferMolecular Cell Biology, Institute of Molecular Physiology, Johannes Gutenberg-University of Mainz, Germany.
Sebastian E J LudwigDepartment of Cellular Biochemistry, Max-Planck-Institute for Biophysical Chemistry, Goettingen, Germany.
Henning UrlaubBioanalytical Mass Spectrometry, Max-Planck-Institute for Biophysical Chemistry, Goettingen, Germany.
Reinhard LührmannDepartment of Cellular Biochemistry, Max-Planck-Institute for Biophysical Chemistry, Goettingen, Germany.
Uwe WolfrumMolecular Cell Biology, Institute of Molecular Physiology, Johannes Gutenberg-University of Mainz, Germany.ORCID 0000-0002-4756-5872
Johannes Gutenberg University Mainz · DEMax Planck Institute for Biophysical Chemistry · DEMashhad University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Splicing is catalyzed by the spliceosome, a compositionally dynamic complex assembled stepwise on pre-mRNA. We reveal links between splicing machinery components and the intrinsically disordered ciliopathy protein SANS. Pathogenic mutations in SANS/USH1G lead to Usher syndrome-the most common cause of deaf-blindness. Previously, SANS was shown to function only in the cytosol and primary cilia. Here, we have uncovered molecular links between SANS and pre-mRNA splicing catalyzed by the spliceosome in the nucleus. We show that SANS is found in Cajal bodies and nuclear speckles, where it interacts with components of spliceosomal sub-complexes such as SF3B1 and the large splicing cofactor SON but also with PRPFs and snRNAs related to the tri-snRNP complex. SANS is required for the transfer of tri-snRNPs between Cajal bodies and nuclear speckles for spliceosome assembly and may also participate in snRNP recycling back to Cajal bodies. SANS depletion alters the kinetics of spliceosome assembly, leading to accumulation of complex A. SANS deficiency and USH1G pathogenic mutations affects splicing of genes related to cell proliferation and human Usher syndrome. Thus, we provide the first evidence that splicing dysregulation may participate in the pathophysiology of Usher syndrome.

Indexed as

Alternative SplicingCell NucleusCell ProliferationCoiled BodiesDNA-Binding ProteinsEye ProteinsGene Knockdown TechniquesHEK293 CellsHumansImmunohistochemistryIn Situ Hybridization, FluorescenceMass SpectrometryMicroscopy, Electron, TransmissionMinor Histocompatibility AntigensNerve Tissue ProteinsPhosphoproteinsDNA-Binding ProteinsEye ProteinsMinor Histocompatibility AntigensNerve Tissue ProteinsPhosphoproteinsPRPF31 protein, humanPRPF6 protein, humanRibonucleoproteins, Small NuclearRibonucleoprotein, U4-U6 Small NuclearRNA PrecursorsRNA, Small NuclearRNA Splicing FactorsSF3B1 protein, humanSON protein, humanTranscription FactorsUSH1G protein, human

Identifiers

PMID34023904
PMCPMC8191790
OpenAlexW3101416645

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.