Evidence map›Paper›PMID 34022815›Full record

ArticleBMC medical research methodology2021

Classification of PR-positive and PR-negative subtypes in ER-positive and HER2-negative breast cancers based on pathway scores.

Taobo Hu, Yan Chen, Yiqiang Liu, Danhua Zhang, Jiankang Pan, Mengping Long

Open access · goldAbstract read
In one paragraph

Article in BMC medical research methodology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

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  9. International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Taobo HuDepartment of Breast Disease, Peking University People's Hospital, Beijing, China.
Yan ChenCollege of Life Sciences, University of Chinese Academy of Sciences, Beijing, China.
Yiqiang LiuDepartment of Pathology, Peking University Cancer Hospital, Beijing, China.
Danhua ZhangDepartment of General Surgery, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
Jiankang PanDepartment of Orthopedics, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China. 188202109@csu.edu.cn.
Mengping LongDepartment of Pathology, Peking University Cancer Hospital, Beijing, China. mplong@connect.ust.hk.
Peking University · CNSecond Xiangya Hospital of Central South University · CNPeking University Cancer Hospital · CNUniversity of Chinese Academy of Sciences · CN

Funding

National Natural Science Foundation of China 82002979
6 · The paper itself

Abstract

purposePR loss in ER+/HER2- breast cancer indicates worse prognosis and insensitivity to anti-estrogen therapy, while the mechanisms of PR loss in ER+/HER2- breast cancer remain unrevealed.

methodsIn this study, ER+/PR+/HER2- and ER+/PR-/HER2- breast cancer cases from TCGA were used. 1387 pathways were analyzed and used as variables for classifying the two groups with LASSO regression.

resultsER+/PR+/HER2- and ER+/PR-/HER2- breast cancer groups can be classified by a combination of 13 pathways using their activity score. Among the 13 pathways, those involving growth factors and ion-channel transporters were most significant in the distinction, followed by pathways involving immune modulation and cell metabolism. Two growth factor pathways, EGF and IGF-1, were deferentially regulated in ER+/PR+/HER2- and ER+/PR-/HER2- groups.

conclusionsIn conclusion, this study indicated in ER+/HER2- breast cancers the various status of PR expression can be an indication of molecular variation, particularly for the growth factor pathway activation.

Indexed as

Breast NeoplasmsBiomarkers, TumorErb-b2 Receptor Tyrosine KinasesFemaleHumansPrognosisReceptors, EstrogenReceptors, ProgesteroneBiomarkers, TumorErb-b2 Receptor Tyrosine KinasesReceptors, EstrogenReceptors, ProgesteroneEstrogen receptor, Progesterone receptorGrowth factorLASSOPathway activities

Identifiers

PMID34022815
PMCPMC8141178
OpenAlexW3165027050

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.