Evidence map›Paper›PMID 34022241›Full record

ArticleBiophysical journal2021

Functional integrity of membrane protein rhodopsin solubilized by styrene-maleic acid copolymer.

Stephanie G Pitch, Weekie Yao, Istvan Szundi, Jonathan Fay, Eefei Chen, Anthony Shumate, David S Kliger, David L Farrens

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Stephanie G PitchDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, California.
Weekie YaoDepartment of Chemical Physiology and Biochemistry, Oregon Health and Science University, Portland, Oregon.
Istvan SzundiDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, California.
Jonathan FayDepartment of Chemical Physiology and Biochemistry, Oregon Health and Science University, Portland, Oregon.
Eefei ChenDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, California.
Anthony ShumateDepartment of Chemical Physiology and Biochemistry, Oregon Health and Science University, Portland, Oregon.
David S KligerDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, Santa Cruz, California.
David L FarrensDepartment of Chemical Physiology and Biochemistry, Oregon Health and Science University, Portland, Oregon. Electronic address: farrensd@ohsu.edu.
Oregon Health & Science University · USUniversity of California, Santa Cruz · US

Funding

BIOLOGICAL BASES OF DRUG-SEEKING BEHAVIORT32DA007262 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI WILLIAMS, JOHN T · 1991 to 2022
$9.4M
Structural Dynamics in Rhodopsin Activation and AttenuationR01EY029343 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI David L Farrens · 2019 to 2026
$2.9M
Crystallization and Structural Analysis of the Human Cannabinoid Receptor CB1R21DA043001 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI FARRENS, DAVID L · 2017 to 2018
$424k
An investigation of the mechanisms governing allosterism and G-protein selectivity of the human cannabinoid receptor, CB1.    F31DA049438 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI SHUMATE, ANTHONY D · 2019 to 2021
$137k
NEI NIH HHS R01 EY029343NIDA NIH HHS F31 DA049438NIDA NIH HHS R21 DA043001NIDA NIH HHS T32 DA007262
6 · The paper itself

Abstract

Membrane proteins often require solubilization to study their structure or define the mechanisms underlying their function. In this study, the functional properties of the membrane protein rhodopsin in its native lipid environment were investigated after being solubilized with styrene-maleic acid (SMA) copolymer. The static absorption spectra of rhodopsin before and after the addition of SMA were recorded at room temperature to quantify the amount of membrane protein solubilized. The samples were then photobleached to analyze the functionality of rhodopsin upon solubilization. Samples with low or high SMA/rhodopsin ratios were compared to find a threshold in which the maximal amount of active rhodopsin was solubilized from membrane suspensions. Interestingly, whereas the highest SMA/rhodopsin ratios yielded the most solubilized rhodopsin, the rhodopsin produced under these conditions could not reach the active (Meta II) state upon photoactivation. The results confirm that SMA is a useful tool for membrane protein research, but SMA added in excess can interfere with the dynamics of protein activation.

Indexed as

Membrane ProteinsRhodopsinLipidsMaleatesLipidsMaleatesmaleic acidMembrane ProteinsRhodopsin

Identifiers

PMID34022241
PMCPMC8391062
OpenAlexW3164657202

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.