Evidence map›Paper›PMID 34021769›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2021

qTGW12a, a naturally varying QTL, regulates grain weight in rice.

Zhixuan Du, Zhou Huang, Jianbin Li, Jianzhong Bao, Hang Tu, Chuihai Zeng, Zheng Wu, Haihui Fu, Jie Xu, Dahu Zhou and 3 more

Abstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Identification of a novel locus qGW12/OsPUB23 regulating grain shape and weight in rice (Oryza sativa L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  8. Review
  9. GW3, encoding a member of the P450 subfamily, controls grain width by regulating the GATAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  10. Article
  11. Article
  12. Rice (Plants (Basel, Switzerland) · 2023
    Article
  13. Article
  14. Non-vernalization requirement in Chinese kale caused by loss of BoFLC and low expressions of its paralogs.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Zhixuan Du *Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Zhou Huang *Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Jianbin LiKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Jianzhong BaoKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Hang TuKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Chuihai ZengKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Zheng WuKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Haihui FuKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Jie XuKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Dahu ZhouKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Changlan ZhuKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China.
Junru FuKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China. fujunru2002@163.com.ORCID http://orcid.org/0000-0003-4712-4652
Haohua HeKey Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University, Nanchang, 330045, Jiangxi Province, China. hhhua64@163.com.

Funding

Key Research and Development Program of Jiangxi Province 20161BBF60129National Key Research and Development Program "Seven Major Crop Breeding " Key Project 2017YFD0100301
6 · The paper itself

Abstract

key messageA stable QTL associated with rice grain type with a large effect value was found in multiple environments, and its candidate genes were verified by genetic transformation. Rice (Oryza sativa L.) grain size is critical to both yield and appearance quality. Therefore, the discovery and identification of rice grain size genes can provide pathways for the cultivation of high-yielding varieties. In the present work, 45,607 SNP markers were used to construct a high-density genetic map of rice recombinant inbred lines, and hence a total of 14 quantitative trait loci (QTLs) were detected based on the phenotypic data of grain weight, grain length and grain width under four different environments. qTGW12a and qGL12 are newly detected QTLs related to grain weight, and are located between 22.43 Mb and 22.45 Mb on chromosome 12. Gene annotation shows that the QTL region contains the LOC_Os12g36660 annotated gene, which encodes the multidrug and toxic compound extrusion (MATE) transporter. Mutations in exons and the splice site were responsible for the changes in grain type and weight. Gene knockout experiments were used to verify these results. Hence, these results provide a basis for the cloning of qTGW12a. This discovery provides new insights for studying the genetic mechanism of rice grain morphology, and reveals a promising gene to ultimately increase rice yield.

Indexed as

Gene Expression Regulation, PlantQuantitative Trait LociChromosome MappingChromosomes, PlantMicrosatellite RepeatsOryzaPhenotypePlant ProteinsPlant Proteins

Identifiers

PMID34021769
PMCPMC8354980

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.