Evidence map›Paper›PMID 34021685›Full record

ArticleVeterinary and comparative oncology2022

Characterizing the molecular and immune landscape of canine bladder cancer.

Kathryn E Cronise, Sunetra Das, Belen G Hernandez, Daniel P Regan, Deanna D Dailey, Robert I McGeachan, Susan E Lana, Rodney L Page, Daniel L Gustafson, Dawn L Duval

Open access · greenAbstract read
In one paragraph

Article in Veterinary and comparative oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
10.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
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  4. Review
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  8. Article
  9. Review
  10. Review of Molecular Technologies for Investigating Canine Cancer.Animals : an open access journal from MDPI · 2024
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. The miRNome of canine invasive urothelial carcinoma.Frontiers in veterinary science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Kathryn E CroniseFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado, USA.
Sunetra DasFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado, USA.
Belen G HernandezFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado, USA.
Daniel P ReganFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado, USA.ORCID https://orcid.org/0000-0002-3148-1332
Deanna D DaileyFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado, USA.
Robert I McGeachanFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado, USA.ORCID https://orcid.org/0000-0003-1647-8642
Susan E LanaFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado, USA.
Rodney L PageFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado, USA.
Daniel L GustafsonFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado, USA.
Dawn L DuvalFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado, USA.ORCID https://orcid.org/0000-0002-5310-0078
Colorado State University · USUniversity of Colorado Cancer Center · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
Elucidating the role and regulation of periostin in therapy-induced chemoresistance in metastatic breast cancerK01OD022982 · OD · COLORADO STATE UNIVERSITY · PI REGAN, DANIEL PATRICK · 2016 to 2021
$720k
Veterinary Scholars Summer Research ProgramT35OD015130 · OD · COLORADO STATE UNIVERSITY · PI ZABEL, MARK D · 2012 to 2021
$654k
Anschutz FoundationColorado State University CVMBS College Research CouncilMerial Veterinary Scholars ProgramMorris Animal Foundation D16CA-071NCATS NIH HHS L30 TR002126NCI NIH HHS P30 CA046934NIH HHS K01 OD022982NIH HHS K01OD022982NIH HHS L30TR002126NIH HHS T35 OD015130NIH HHS T35OD015130Shipley University Chair in Comparative OncologyUniversity of Colorado Comprehensive Cancer Center Support Grant P30-CA046934
6 · The paper itself

Abstract

Transitional cell carcinoma (TCC), also known as urothelial carcinoma, is the most common bladder cancer in humans and dogs. Approximately one-quarter of human TCCs are muscle-invasive and associated with a high risk of death from metastasis. Canine TCC (cTCC) tumours are typically high-grade and muscle-invasive. Shared similarities in risk factors, histopathology, and clinical presentation suggest that cTCC may serve as a model for the assessment of novel therapeutics that may inform therapies for human muscle-invasive TCC. The goal of this study was to characterize cTCC at the molecular level to identify drivers of oncogenesis and druggable targets. We performed whole exome sequencing (WES) of 11 cTCC tumours and three matched normal samples, identifying 583 variants in protein-coding genes. The most common variant was a V-to-E missense mutation in BRAF, identified in 4 out of 11 samples (36%) via WES. Sanger sequencing identified BRAF variants in 8 out of the same 11 cTCC samples, as well as in 22 out of 32 formalin-fixed paraffin embedded (FFPE) cTCC samples, suggesting an overall prevalence of 70%. RNA-Seq was performed to compare the gene expression profiles of cTCC tumours to normal bladder tissue. cTCC tumours exhibited up-regulation of genes involved in the cell cycle, DNA repair, and antiviral immunity. We also analysed the immune landscape of cTCC using immune gene signatures and immunohistochemical analysis. A subset of tumours had characteristics of a hot tumour microenvironment and exhibited high expression of signatures associated with complete response to PD-1/PD-L1 blockade in human bladder cancer.

Indexed as

Carcinoma, Transitional CellDog DiseasesUrinary Bladder NeoplasmsAnimalsDogsProto-Oncogene Proteins B-rafTranscriptomeTumor MicroenvironmentProto-Oncogene Proteins B-rafbladder cancerBRAFcanineimmunotherapyPD-L1transitional cell carcinomaurothelial carcinoma

Identifiers

PMID34021685
PMCPMC8606617
OpenAlexW3163604233

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.