Evidence map›Paper›PMID 34021366›Full record

ArticleEuropean biophysics journal : EBJ2021

Substitution of histidine 30 by asparagine in manganese superoxide dismutase alters biophysical properties and supports proliferation in a K562 leukemia cell line.

Rosalin Bonetta, Gary J Hunter, Chi H Trinh, Tomasz Borowski, Anthony G Fenech, Maria Kulp, Leandro C Tabares, Sun Un, Thérèse Hunter

Open access · hybridAbstract read
In one paragraph

Article in European biophysics journal : EBJ, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 5 countries.

Rosalin BonettaCentre of Molecular Medicine & Biobanking, University of Malta, Msida, Malta. r.bonetta@qmul.ac.uk.ORCID http://orcid.org/0000-0003-4696-7770
Gary J HunterDepartment of Physiology and Biochemistry, Faculty of Medicine and Surgery, University of Malta, Msida, Malta.
Chi H TrinhAstbury Centre for Structural Molecular Biology, Institute of Molecular and Cellular Biology, University of Leeds, Leeds, UK.
Tomasz BorowskiJerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, Krakow, Poland.
Anthony G FenechDepartment of Clinical Pharmacology and Therapeutics, Faculty of Medicine and Surgery, University of Malta, Msida, Malta.
Maria KulpDepartment of Chemistry, Tallinn University of Technology, Tallinn, Estonia.
Leandro C TabaresInstitute for Integrative Biology of the Cell (I2BC), Université Paris-Saclay, CEA, CNRS, 91198, Gif-sur-Yvette, France.
Sun UnInstitute for Integrative Biology of the Cell (I2BC), Université Paris-Saclay, CEA, CNRS, 91198, Gif-sur-Yvette, France.
Thérèse HunterDepartment of Physiology and Biochemistry, Faculty of Medicine and Surgery, University of Malta, Msida, Malta.
University of Malta · MTCentre National de la Recherche Scientifique · FRJerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences · PLQueen Mary University of London · GBTallinn University of Technology · EEUniversity of Leeds · GB

Funding

COST Action CM1305 38437Faculty of Medicine and Surgery, University of Malta Medin08-01French Infrastructure for Integrated Structural Biology ANR-10-INBS-05-05Wellcome TrustWellcome Trust 094232
6 · The paper itself

Abstract

We have generated a mutant of C. elegans manganese superoxide dismutase at histidine 30 by site-directed mutagenesis. The structure was solved at a resolution of 1.52 Å by X-ray crystallography (pdb: 6S0D). His30 was targeted, as it forms as a gateway residue at the top of the solvent access funnel to the active site, together with Tyr34. In the wild-type protein, these gateway residues are involved in the hydrogen-bonding network providing the protons necessary for the catalytic reaction at the metal center. However, biophysical characterization and cell viability experiments reveal that a mutation from histidine to asparagine in the H30N mutant modifies metal selectivity in the protein, favoring the uptake of iron over manganese in minimal media conditions, alters active-site coordination from the characteristic trigonal bipyramidal to octahedral geometry, and encourages cellular proliferation in K562 cells, when added exogenously to the cells.

Indexed as

LeukemiaAnimalsAsparagineBinding SitesCaenorhabditis elegansCell ProliferationCrystallography, X-RayHistidineHumansK562 CellsProtein ConformationSuperoxide DismutaseAsparagineHistidineSuperoxide DismutaseBiophysicsProteinsSpectroscopyStructural modellingSuperoxide dismutaseX-ray crystallography

Identifiers

PMID34021366
PMCPMC8190026
OpenAlexW3160685127

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.