Evidence map›Paper›PMID 34021242›Full record

ArticleCommunications biology2021

Cryptic developmental events determine medulloblastoma radiosensitivity and cellular heterogeneity without altering transcriptomic profile.

Daniel Shiloh Malawsky, Seth J Weir, Jennifer Karin Ocasio, Benjamin Babcock, Taylor Dismuke, Abigail H Cleveland, Andrew M Donson, Rajeev Vibhakar, Kirk Wilhelmsen, Timothy R Gershon

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. OLIG2 Is a Determinant for the Relapse of MYC-Amplified Medulloblastoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2022
    Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Daniel Shiloh Malawsky *Department of Neurology, University of North Carolina School of Medicine, Chapel Hill, NC, USA.ORCID 0000-0003-4421-8688
Seth J Weir *Department of Neurology, University of North Carolina School of Medicine, Chapel Hill, NC, USA.
Jennifer Karin OcasioDepartment of Neurology, University of North Carolina School of Medicine, Chapel Hill, NC, USA.
Benjamin BabcockDepartment of Neurology, University of North Carolina School of Medicine, Chapel Hill, NC, USA.ORCID 0000-0002-2902-8045
Taylor DismukeDepartment of Neurology, University of North Carolina School of Medicine, Chapel Hill, NC, USA.
Abigail H ClevelandDepartment of Neurology, University of North Carolina School of Medicine, Chapel Hill, NC, USA.ORCID 0000-0002-3502-5940
Andrew M DonsonDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.
Rajeev VibhakarDepartment of Pediatrics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.
Kirk WilhelmsenDepartment of Neurology, University of North Carolina School of Medicine, Chapel Hill, NC, USA. kirk@med.unc.edu.ORCID 0000-0002-4432-8302
Timothy R GershonDepartment of Neurology, University of North Carolina School of Medicine, Chapel Hill, NC, USA. gershont@neurology.unc.edu.ORCID 0000-0001-7034-6400
University of North Carolina at Chapel Hill · USMorgan Adams Foundation · US

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI David Darr · 1985 to 2026
$201.5M
Re-Entry Supplement: Investigation of Oral Microbial Enzymes for the Detection and Treatment of Periodontal DiseaseUL1TR002489 · NCATS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BUSE, JOHN BERNARD, SHAHEEN, NICHOLAS J · 2018 to 2022
$48.6M
PILOT AND FEASIBILITY STUDIESP30DK034987 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Temitope O. Keku · 1985 to 2026
$30.5M
CANCER CELL BIOLOGY TRAINING PROGRAMT32CA071341 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CHANNING J. DER, Yuliya Pylayeva-Gupta · 1996 to 2026
$5.0M
Bcl-xL-regulated apoptosis in cerebellar development and medulloblastoma treatmentR01NS102627 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GERSHON, TIMOTHY · 2018 to 2022
$1.8M
Defining the crucial role of MAGOH in cerebellar development and the potential for targeting the EJC in medulloblastoma treatmentR01NS106227 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GERSHON, TIMOTHY · 2018 to 2023
$1.7M
Glycolytic regulation of cerebellar development and medulloblastoma tumorigenesisR01NS088219 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GERSHON, TIMOTHY · 2015 to 2019
$1.6M
Proliferation of cerebellar neural progenitors and Shh-driven medulloblastoma requires suppression of WNT by GSK-3F31NS100489 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI OCASIO ADORNO, JENNIFER KARIN · 2017 to 2018
$70k
Improving CDK 4/6 inhibition in the treatment of medulloblastomaF31NS120459 · NINDS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DISMUKE, TAYLOR YVETTE · 2020 to 2022
$59k
NCATS NIH HHS UL1 TR002489NCI NIH HHS P30 CA016086NCI NIH HHS T32 CA071341NIDDK NIH HHS P30 DK034987NINDS NIH HHS F31 NS100489NINDS NIH HHS F31 NS120459NINDS NIH HHS R01 NS088219NINDS NIH HHS R01 NS102627NINDS NIH HHS R01 NS106227
6 · The paper itself

Abstract

It is unclear why medulloblastoma patients receiving similar treatments experience different outcomes. Transcriptomic profiling identified subgroups with different prognoses, but in each subgroup, individuals remain at risk of incurable recurrence. To investigate why similar-appearing tumors produce variable outcomes, we analyzed medulloblastomas triggered in transgenic mice by a common driver mutation expressed at different points in brain development. We genetically engineered mice to express oncogenic SmoM2, starting in multipotent glio-neuronal stem cells, or committed neural progenitors. Both groups developed medulloblastomas with similar transcriptomic profiles. We compared medulloblastoma progression, radiosensitivity, and cellular heterogeneity, determined by single-cell transcriptomic analysis (scRNA-seq). Stem cell-triggered medulloblastomas progressed faster, contained more OLIG2-expressing stem-like cells, and consistently showed radioresistance. In contrast, progenitor-triggered MBs progressed slower, down-regulated stem-like cells and were curable with radiation. Progenitor-triggered medulloblastomas also contained more diverse stromal populations, with more Ccr2+ macrophages and fewer Igf1+ microglia, indicating that developmental events affected the subsequent tumor microenvironment. Reduced mTORC1 activity in M-Smo tumors suggests that differential Igf1 contributed to differences in phenotype. Developmental events in tumorigenesis that were obscure in transcriptomic profiles thus remained cryptic determinants of tumor composition and outcome. Precise understanding of medulloblastoma pathogenesis and prognosis requires supplementing transcriptomic/methylomic studies with analyses that resolve cellular heterogeneity.

Indexed as

Cell LineageAnimalsCerebellar NeoplasmsGene Expression Regulation, DevelopmentalGenetic HeterogeneityHumansMedulloblastomaMiceMice, Inbred C57BLMice, TransgenicRadiation ToleranceSingle-Cell AnalysisStem CellsTranscriptomeTumor Microenvironment

Identifiers

PMID34021242
PMCPMC8139976
OpenAlexW3107991105

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.