Evidence map›Paper›PMID 34021165›Full record

ArticleNPJ genomic medicine2021

Transcriptome-wide association study uncovers the role of essential genes in anthracycline-induced cardiotoxicity.

Erika N Scott, Galen E B Wright, Britt I Drögemöller, Jafar S Hasbullah, Erandika P Gunaretnam, Fudan Miao, Amit P Bhavsar, Fei Shen, Bryan P Schneider, Bruce C Carleton and 1 more

Open access · goldAbstract read
In one paragraph

Article in NPJ genomic medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Evaluating statistical significance in aComputational and structural biotechnology journal · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Erika N ScottFaculty of Medicine, Department of Medical Genetics, University of British Columbia, Vancouver, BC, Canada.
Galen E B WrightFaculty of Medicine, Department of Medical Genetics, University of British Columbia, Vancouver, BC, Canada.ORCID http://orcid.org/0000-0003-2415-7339
Britt I DrögemöllerBritish Columbia Children's Hospital Research Institute, Vancouver, BC, Canada.
Jafar S HasbullahFaculty of Medicine, Department of Medical Genetics, University of British Columbia, Vancouver, BC, Canada.
Erandika P GunaretnamBritish Columbia Children's Hospital Research Institute, Vancouver, BC, Canada.
Fudan MiaoBritish Columbia Children's Hospital Research Institute, Vancouver, BC, Canada.
Amit P BhavsarBritish Columbia Children's Hospital Research Institute, Vancouver, BC, Canada.
Fei ShenDivision of Hematology/Oncology, Department of Medicine, Indiana University, Indianapolis, IN, USA.
Bryan P SchneiderDivision of Hematology/Oncology, Department of Medicine, Indiana University, Indianapolis, IN, USA.
Bruce C CarletonBritish Columbia Children's Hospital Research Institute, Vancouver, BC, Canada.
Colin J D RossFaculty of Medicine, Department of Medical Genetics, University of British Columbia, Vancouver, BC, Canada. colin.ross@ubc.ca.ORCID http://orcid.org/0000-0003-1476-7037
University of British Columbia · CAIndiana University – Purdue University Indianapolis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anthracyclines are highly effective chemotherapeutic agents; however, their clinical utility is limited by severe anthracycline-induced cardiotoxicity (ACT). Genome-wide association studies (GWAS) have uncovered several genetic variants associated with ACT, but the impact of these findings requires further elucidation. We conducted a transcriptome-wide association study (TWAS) using our previous GWAS summary statistics (n = 280 patients) to identify gene expression-related associations with ACT. We identified a genetic association between decreased expression of GDF5 and ACT (Z-score = -4.30, P = 1.70 × 10

Identifiers

PMID34021165
PMCPMC8140137
OpenAlexW3163464093

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.