Evidence map›Paper›PMID 34021146›Full record

ArticleNature communications2021

RTEL1 influences the abundance and localization of TERRA RNA.

Fiorella Ghisays, Aitor Garzia, Hexiao Wang, Claudia Canasto-Chibuque, Marcel Hohl, Sharon A Savage, Thomas Tuschl, John H J Petrini

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 53 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Mechanisms underlining R-loop biology and implications for human disease.Frontiers in cell and developmental biology · 2025
    Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Discovery of a Novel Shared Variant AmongInternational journal of genomics · 2024
    Article
  16. Article
  17. Article
  18. Review
  19. A Large-Scale Exome-Wide Association Study Identifies Novel Germline Mutations in Lung Cancer.American journal of respiratory and critical care medicine · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Fiorella GhisaysMolecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-7682-7720
Aitor GarziaLaboratory for RNA Molecular Biology, The Rockefeller University, New York, NY, USA.ORCID 0000-0002-6270-1369
Hexiao WangMolecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.ORCID 0000-0001-5191-0643
Claudia Canasto-ChibuqueMolecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-0787-5892
Marcel HohlMolecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.
Sharon A SavageClinical Genetics Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, USA.ORCID 0000-0001-6006-0740
Thomas TuschlLaboratory for RNA Molecular Biology, The Rockefeller University, New York, NY, USA.
John H J PetriniMolecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY, USA. petrinij@mskcc.org.ORCID 0000-0001-5102-5679
Memorial Sloan Kettering Cancer Center · USRockefeller University · USNational Cancer Institute · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
MSKCC Pilot Center for Precision Disease ModelingU54OD020355 · OD · SLOAN-KETTERING INST CAN RESEARCH · PI LOWE, SCOTT W., SOLIT, DAVID B. · 2015 to 2019
$9.9M
ROLES OF MRELL AND RAD50 IN THE DNA DAMAGE RESPONSER01GM056888 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI PETRINI, JOHN HJ · 1998 to 2019
$8.6M
DNA Damage & DNA Replication: a Complex RelationshipR35GM136278 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI John HJ Petrini · 2020 to 2026
$5.5M
NCI NIH HHS P30 CA008748NIGMS NIH HHS R01 GM056888NIGMS NIH HHS R35 GM136278NIH HHS U54 OD020355
6 · The paper itself

Abstract

Telomere repeat containing RNAs (TERRAs) are a family of long non-coding RNAs transcribed from the subtelomeric regions of eukaryotic chromosomes. TERRA transcripts can form R-loops at chromosome ends; however the importance of these structures or the regulation of TERRA expression and retention in telomeric R-loops remain unclear. Here, we show that the RTEL1 (Regulator of Telomere Length 1) helicase influences the abundance and localization of TERRA in human cells. Depletion of RTEL1 leads to increased levels of TERRA RNA while reducing TERRA-containing R loops at telomeres. In vitro, RTEL1 shows a strong preference for binding G-quadruplex structures which form in TERRA. This binding is mediated by the C-terminal region of RTEL1, and is independent of the RTEL1 helicase domain. RTEL1 binding to TERRA appears to be essential for cell viability, underscoring the importance of this function. Degradation of TERRA-containing R-loops by overexpression of RNAse H1 partially recapitulates the increased TERRA levels and telomeric instability associated with RTEL1 deficiency. Collectively, these data suggest that regulation of TERRA is a key function of the RTEL1 helicase, and that loss of that function may contribute to the disease phenotypes of patients with RTEL1 mutations.

Indexed as

DNA-Binding ProteinsDNA HelicasesGene Knockout TechniquesHEK293 CellsHumansProtein DomainsRibonuclease HR-Loop StructuresRNASequence AlignmentTelomereTranscription FactorsDMRT2 protein, humanDNA-Binding ProteinsDNA HelicasesRibonuclease Hribonuclease HIRNARTEL1 protein, humanTranscription Factors

Identifiers

PMID34021146
PMCPMC8140157
OpenAlexW3162806359

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.