Evidence map›Paper›PMID 34020947›Full record

ArticleScience advances2021

FluoSTEPs: Fluorescent biosensors for monitoring compartmentalized signaling within endogenous microdomains.

Brian Tenner, Jason Z Zhang, Yonghoon Kwon, Veronica Pessino, Siyu Feng, Bo Huang, Sohum Mehta, Jin Zhang

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 38 citations in OpenAlex.

  1. Sensing and Reprogramming Surface Receptor Activation With Synthetic Transcriptional Circuits.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Brian TennerDepartment of Pharmacology, University of California, San Diego, La Jolla, CA 92093, USA.ORCID 0000-0002-7864-5285
Jason Z ZhangDepartment of Pharmacology, University of California, San Diego, La Jolla, CA 92093, USA.ORCID 0000-0003-0091-6273
Yonghoon KwonDepartment of Pharmacology, University of California, San Diego, La Jolla, CA 92093, USA.
Veronica PessinoGraduate Program of Biophysics, University of California, San Francisco, San Francisco, CA 94143, USA.
Siyu FengThe UC Berkeley-UCSF Graduate Program in Bioengineering, San Francisco, CA 94143, USA.ORCID 0000-0001-8499-6914
Bo HuangDepartment of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0003-1704-4141
Sohum MehtaDepartment of Pharmacology, University of California, San Diego, La Jolla, CA 92093, USA. jzhang32@ucsd.edu sohum@ucsd.edu.ORCID 0000-0003-4764-8579
Jin ZhangDepartment of Pharmacology, University of California, San Diego, La Jolla, CA 92093, USA. jzhang32@ucsd.edu sohum@ucsd.edu.ORCID 0000-0001-7145-7823
University of California San Diego · USUniversity of California, San Francisco · USJohns Hopkins University · USUniversity of California, Berkeley · US

Funding

Live-cell Activity Architecture in CancerR35CA197622 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Jin Zhang · 2015 to 2026
$11.2M
Mechanisms of Compartmentalized cAMP SignalingR01DK073368 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Jin Zhang · 2006 to 2026
$7.6M
Mapping endogenous protein dynamics in living cellsR01GM131641 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Bo Huang · 2019 to 2026
$2.6M
Structure mapping of molecular complexes by super-resolution microscopyR01GM124334 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HUANG, BO · 2018 to 2021
$1.3M
Multimerized GFP probe for live cell imagingR21EB022798 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HUANG, BO · 2016 to 2017
$436k
NCI NIH HHS R35 CA197622NIBIB NIH HHS R21 EB022798NIDDK NIH HHS R01 DK073368NIGMS NIH HHS R01 GM124334NIGMS NIH HHS R01 GM131641
6 · The paper itself

Abstract

Growing evidence suggests that many essential intracellular signaling events are compartmentalized within kinetically distinct microdomains in cells. Genetically encoded fluorescent biosensors are powerful tools to dissect compartmentalized signaling, but current approaches to probe these microdomains typically rely on biosensor fusion and overexpression of critical regulatory elements. Here, we present a novel class of biosensors named FluoSTEPs (fluorescent sensors targeted to endogenous proteins) that combine self-complementing split green fluorescent protein, CRISPR-mediated knock-in, and fluorescence resonance energy transfer biosensor technology to probe compartmentalized signaling dynamics in situ. We designed FluoSTEPs for simultaneously highlighting endogenous microdomains and reporting domain-specific, real-time signaling events including kinase activities, guanosine triphosphatase activation, and second messenger dynamics in live cells. A FluoSTEP for 3',5'-cyclic adenosine monophosphate (cAMP) revealed distinct cAMP dynamics within clathrin microdomains in response to stimulation of G protein-coupled receptors, showcasing the utility of FluoSTEPs in probing spatiotemporal regulation within endogenous signaling architectures.

Indexed as

Biosensing TechniquesCyclic AMPColoring AgentsFluorescence Resonance Energy TransferGreen Fluorescent ProteinsSignal TransductionColoring AgentsCyclic AMPGreen Fluorescent Proteins

Identifiers

PMID34020947
PMCPMC8139597
OpenAlexW3161014730

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.