Evidence map›Paper›PMID 34016985›Full record

ArticleNature communications2021

The impact of chromosomal fusions on 3D genome folding and recombination in the germ line.

Covadonga Vara, Andreu Paytuví-Gallart, Yasmina Cuartero, Lucía Álvarez-González, Laia Marín-Gual, Francisca Garcia, Beatriu Florit-Sabater, Laia Capilla, Rosa Ana Sanchéz-Guillén, Zaida Sarrate and 7 more

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Isolation of Germ Cell Populations from Mouse Testis by Flow Cytometry.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Covadonga VaraDepartament de Biologia Cellular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.ORCID 0000-0002-8264-9262
Andreu Paytuví-GallartDepartament de Biologia Cellular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.ORCID 0000-0002-0958-6592
Yasmina CuarteroCentre for Genomic Regulation, The Barcelona Institute for Science and Technology, Barcelona, Spain.
Lucía Álvarez-GonzálezDepartament de Biologia Cellular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.
Laia Marín-GualDepartament de Biologia Cellular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.ORCID 0000-0003-1480-0976
Francisca GarciaServei de Cultius Cel.lulars, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.
Beatriu Florit-SabaterDepartament de Biologia Cellular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.
Laia CapillaGenome Integrity and Instability Group, Institut de Biotecnologia i Biomedicina, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.
Rosa Ana Sanchéz-GuillénDepartament de Biologia Cellular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.
Zaida SarrateDepartament de Biologia Cellular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.ORCID 0000-0001-9677-1376
Riccardo Aiese CiglianoSequentia Biotech, Barcelona, Spain.
Walter SanseverinoSequentia Biotech, Barcelona, Spain.ORCID 0000-0003-3324-5912
Jeremy B SearleDepartment of Ecology and Evolutionary Biology, Corson Hall, Cornell University, Ithaca, NY, USA.
Jacint VenturaDepartament de Biologia Animal, Biologia Vegetal i Ecologia, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.
Marc A Marti-RenomCentre for Genomic Regulation, The Barcelona Institute for Science and Technology, Barcelona, Spain.ORCID 0000-0002-0151-4279
François Le DilyCentre for Genomic Regulation, The Barcelona Institute for Science and Technology, Barcelona, Spain.ORCID 0000-0002-8324-7927
Aurora Ruiz-HerreraDepartament de Biologia Cellular, Fisiologia i Immunologia, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain. aurora.ruizherrera@uab.cat.ORCID 0000-0003-3868-6151

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The spatial folding of chromosomes inside the nucleus has regulatory effects on gene expression, yet the impact of genome reshuffling on this organization remains unclear. Here, we take advantage of chromosome conformation capture in combination with single-nucleotide polymorphism (SNP) genotyping and analysis of crossover events to study how the higher-order chromatin organization and recombination landscapes are affected by chromosomal fusions in the mammalian germ line. We demonstrate that chromosomal fusions alter the nuclear architecture during meiosis, including an increased rate of heterologous interactions in primary spermatocytes, and alterations in both chromosome synapsis and axis length. These disturbances in topology were associated with changes in genomic landscapes of recombination, resulting in detectable genomic footprints. Overall, we show that chromosomal fusions impact the dynamic genome topology of germ cells in two ways: (i) altering chromosomal nuclear occupancy and synapsis, and (ii) reshaping landscapes of recombination.

Indexed as

Recombination, GeneticAnimalsBiological EvolutionCell NucleusCells, CulturedChromatinChromosome PairingChromosomesChromosome SegregationEuropeFertilityGenotyping TechniquesMaleMicePolymorphism, Single NucleotidePrimary Cell CultureChromatin

Identifiers

PMID34016985
PMCPMC8137915

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.