Evidence map›Paper›PMID 34016428›Full record

ArticleFertility and sterility2021

Identifying susceptibility genes for primary ovarian insufficiency on the high-risk genetic background of a fragile X premutation.

Cristina E Trevino, J Christopher Rounds, Krista Charen, Lisa Shubeck, Heather S Hipp, Jessica B Spencer, H Richard Johnston, Dave J Cutler, Michael E Zwick, Michael P Epstein and 13 more

Open access · greenAbstract read
In one paragraph

Article in Fertility and sterility, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 9 institutions in 3 countries.

Cristina E TrevinoDepartment of Human Genetics, Emory University, Atlanta, Georgia.
J Christopher RoundsDepartment of Cell Biology, Emory University, Atlanta, Georgia.
Krista CharenDepartment of Human Genetics, Emory University, Atlanta, Georgia.
Lisa ShubeckDepartment of Human Genetics, Emory University, Atlanta, Georgia.
Heather S HippDepartment of Gynecology and Obstetrics, Emory University, Atlanta, Georgia.
Jessica B SpencerDepartment of Gynecology and Obstetrics, Emory University, Atlanta, Georgia.
H Richard JohnstonDepartment of Human Genetics, Emory University, Atlanta, Georgia.
Dave J CutlerDepartment of Human Genetics, Emory University, Atlanta, Georgia.
Michael E ZwickDepartment of Human Genetics, Emory University, Atlanta, Georgia; Department of Pediatrics, Emory University, Atlanta, Georgia.
Michael P EpsteinDepartment of Human Genetics, Emory University, Atlanta, Georgia.
Anna MurrayUniversity of Exeter Medical School, University of Exeter, Exeter, United Kingdom.
James N MacphersonWessex Regional Genetics Laboratory, Salisbury District Hospital, Salisbury, United Kingdom.
Montserrat MilaBiochemistry and Molecular Genetics Department, Hospital Clinic of Barcelona and Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.
Laia Rodriguez-RevengaBiochemistry and Molecular Genetics Department, Hospital Clinic of Barcelona and Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain; CIBER of Rare Diseases (CIBERER), Instituto de Salud Carlos III, Spain.
Elizabeth Berry-KravisDepartments of Pediatrics, Neurological Sciences, Biochemistry, Rush University Medical Center, Chicago, Illinois.
Deborah A HallDepartment of Neurological Sciences, Rush University, Chicago, Illinois.
Maureen A LeeheyDepartment of Neurology, University of Colorado School of Medicine, Aurora, Colorado.
Ying LiuDepartment of Neurology, University of Colorado School of Medicine, Aurora, Colorado.
Corrine WeltDivision of Endocrinology, Metabolism and Diabetes, University of Utah School of Medicine, Salt Lake City, Utah.
Stephen T WarrenDepartment of Human Genetics, Emory University, Atlanta, Georgia; Department of Pediatrics, Emory University, Atlanta, Georgia; Department of Biochemistry, Emory University, Atlanta, Georgia.
Stephanie L ShermanDepartment of Human Genetics, Emory University, Atlanta, Georgia; Department of Pediatrics, Emory University, Atlanta, Georgia.
Peng JinDepartment of Human Genetics, Emory University, Atlanta, Georgia.
Emily G AllenDepartment of Human Genetics, Emory University, Atlanta, Georgia. Electronic address: emgrave@emory.edu.
Emory University · USUniversity of Colorado Denver · USConsorci Institut D'Investigacions Biomediques August Pi I Sunyer · ESInstituto de Salud Carlos III · ESRush University · USRush University Medical Center · USSalisbury District Hospital · GBUniversity of Exeter · GBUniversity of Utah · US

Funding

Preclinical CoreP50HD103573 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GABRIEL S DICHTER · 2020 to 2026
$9.7M
Recruitment CoreU54NS091859 · NINDS · EMORY UNIVERSITY · PI WARREN, STEPHEN T. · 2014 to 2019
$9.1M
Primary Ovarian Insufficiency: Etiology and Comorbid DiseaseR01HD099487 · NICHD · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI CORRINE K WELT · 2019 to 2026
$2.7M
NICHD NIH HHS P50 HD103573NICHD NIH HHS R01 HD099487NINDS NIH HHS U54 NS091859
6 · The paper itself

Abstract

objectiveTo identify modifying genes that explains the risk of fragile X-associated primary ovarian insufficiency (FXPOI).

designGene-based, case/control association study, followed by a functional screen of highly ranked genes using a Drosophila model.

settingParticipants were recruited from academic and clinical settings. PATIENT(S): Women with a premutation (PM) who experienced FXPOI at the age of 35 years or younger (n = 63) and women with a PM who experienced menopause at the age of 50 years or older (n = 51) provided clinical information and a deoxyribonucleic acid sample for whole genome sequencing. The functional screen was on the basis of Drosophila TRiP lines. INTERVENTION(S): Clinical information and a DNA sample were collected for whole genome sequencing.

main outcome measuresA polygenic risk score derived from common variants associated with natural age at menopause was calculated and associated with the risk of FXPOI. Genes associated with the risk of FXPOI were identified on the basis of the P-value from gene-based association test and an altered level of fecundity when knocked down in the Drosophila PM model.

resultsThe polygenic risk score on the basis of common variants associated with natural age at menopause explained approximately 8% of the variance in the risk of FXPOI. Further, SUMO1 and KRR1 were identified as possible modifying genes associated with the risk of FXPOI on the basis of an untargeted gene analysis of rare variants.

conclusionsIn addition to the large genetic effect of a PM on ovarian function, the additive effects of common variants associated with natural age at menopause and the effect of rare modifying variants appear to play a role in FXPOI risk.

Indexed as

MutationAdultAge FactorsAnimalsAnimals, Genetically ModifiedCase-Control StudiesDrosophila melanogasterFemaleFertilityFragile X Messenger Ribonucleoprotein 1Genetic BackgroundGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMenopauseMiddle AgedFMR1 protein, humanFragile X Messenger Ribonucleoprotein 1Fragile X-associated disordersFXPOIKRR1primary ovarian insufficiencySUMO1

Identifiers

PMID34016428
PMCPMC8494118
OpenAlexW3162423831

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.