Evidence map›Paper›PMID 34016049›Full record

ArticleBMC genomics2021

Prevalence, antibiotic resistance, virulence and genetic diversity of Staphylococcus aureus isolated from bulk tank milk samples of U.S. dairy herds.

Kruthika Patel, Sandra M Godden, Erin E Royster, Brian A Crooker, Timothy J Johnson, Emily A Smith, Srinand Sreevatsan

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 65 citations in OpenAlex.

  1. The prevalence of bovine mastitis-associatedFrontiers in veterinary science · 2022
    Pooled it
  2. MRSA-dominant colonization and synergistic pathogenicity withJournal of orthopaedic translation · 2026
    Article
  3. Detection ofVeterinary sciences · 2026
    Article
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  7. Antibiotics (Basel, Switzerland) · 2025
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  13. Occurrence and diagnostic of intermittent shedding ofFrontiers in veterinary science · 2025
    Review
  14. Review
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  16. Article
  17. Microbiological and Molecular Investigation of Antimicrobial Resistance inAnimals : an open access journal from MDPI · 2024
    Article
  18. Methicillin-ResistantAntibiotics (Basel, Switzerland) · 2024
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kruthika PatelDepartment of Veterinary Population Medicine, University of Minnesota, Saint Paul, MN, 55108, USA. patel310@umn.edu.ORCID http://orcid.org/0000-0002-7964-8672
Sandra M GoddenDepartment of Veterinary Population Medicine, University of Minnesota, Saint Paul, MN, 55108, USA.
Erin E RoysterDepartment of Veterinary Population Medicine, University of Minnesota, Saint Paul, MN, 55108, USA.
Brian A CrookerDepartment of Animal Science, University of Minnesota, Saint Paul, MN, 55108, USA.
Timothy J JohnsonDepartment of Veterinary & Biomedical Sciences, University of Minnesota, Saint Paul, MN, 55108, USA.
Emily A SmithDepartment of Veterinary & Biomedical Sciences, University of Minnesota, Saint Paul, MN, 55108, USA.
Srinand SreevatsanPathobiology & Diagnostic Investigation, Michigan State University, East Lansing, MI, 48824, USA.
University of Minnesota · USMichigan State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundColonization of dairy cows by Staphylococcus aureus (S. aureus), especially those which are multi-drug resistant and toxin producing, is a concern for animal health and well-being as well as public health. The objective of this study was to investigate the prevalence, antibiotic resistance, gene content and virulence determinants of S. aureus in bulk tank milk samples (BTM) from U.S. dairy herds.

resultsBTM samples were collected, once in winter and once in summer, from 189 U.S. dairy herds. Of 365 BTM samples cultured, the sample and herd prevalence of S. aureus in BTM was 46.6% (170 of 365 samples) and 62.4% (118 of 189 herds), respectively. Among a subset of 138 S. aureus isolates that were stored for further analysis, 124 were genome sequenced after being confirmed as S. aureus using phenotypic tests. The most commonly identified antimicrobial resistance-associated gene was norA (99.2%) and mecA gene responsible for methicillin resistance (MRSA) was identified in one isolate (0.8%). The most frequently detected putative virulence genes were aur (100%), hlgB (100%), hlgA, hlgC, hlb (99.2%), lukE (95.9%) and lukD (94.3%). In the 53 staphylococcal enterotoxin positive isolates, sen (37.9%), sem (35.5%), sei (35.5%) and seg (33.1%) were the most frequently detected enterotoxin genes. Among the 14 sequence types (ST) and 18 spa types identified, the most common was ST2187 (20.9%) and t529 (28.2%), respectively. The most predominant clone was CC97 (47.6%) followed by CC unknown (36.3%). The single MRSA isolate belonged to ST72-CC8, spa type t126 and was negative for the tst gene but harbored all the other virulence genes investigated.

conclusionOur findings indicated a high prevalence of S. aureus in BTM of U.S. dairy herds, with isolates showing little evidence of resistance to antibiotics commonly used to treat mastitis. However, isolates often carried genes for the various enterotoxins. This study identified predominant genetic clones. Despite lower prevalence, the presence of MRSA and multi-drug resistant strains in BTM poses a significant risk to animal and public health if their number were to increase in dairy environment. Therefore, it is necessary to continuously monitor the use of antibiotics in dairy cows.

Indexed as

Methicillin-Resistant Staphylococcus aureusStaphylococcal InfectionsAnimalsAnti-Bacterial AgentsCattleDrug Resistance, MicrobialFemaleGenetic VariationMicrobial Sensitivity TestsMilkPrevalenceStaphylococcus aureusVirulenceAnti-Bacterial AgentsAntibiotic resistanceBovine mastitisGenetic diversityStaphylococcus aureusVirulence

Identifiers

PMID34016049
PMCPMC8135151
OpenAlexW3162089145

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.