Evidence map›Paper›PMID 34014604›Full record

ArticleCancer science2021

Single nucleotide variants of succinate dehydrogenase A gene in renal cell carcinoma.

Takao Kamai, Satoru Higashi, Satoshi Murakami, Kyoko Arai, Takashi Namatame, Toshiki Kijima, Hideyuki Abe, Tsengelmaa Jamiyan, Kazuyuki Ishida, Hiromichi Shirataki and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cancer science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. [Succinate Dehydrogenase-Deficient Renal Cell Carcinoma: Clinicopathological Analysis of 11 Cases].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2024
    Article
  5. Review
  6. Article
  7. Succinate dehydrogenase complex subunit C: Role in cellular physiology and disease.Experimental biology and medicine (Maywood, N.J.) · 2023
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Takao KamaiDepartment of Urology, Dokkyo Medical University, Mibu, Japan.ORCID https://orcid.org/0000-0002-7086-6964
Satoru HigashiDepartment of Molecular and Cell Biology, Dokkyo Medical University, Mibu, Japan.
Satoshi MurakamiDepartment of Urology, Dokkyo Medical University, Mibu, Japan.
Kyoko AraiDepartment of Urology, Dokkyo Medical University, Mibu, Japan.
Takashi NamatameComprehensive Research Facilities for Advanced Medical Science, Dokkyo Medical University, Mibu, Japan.
Toshiki KijimaDepartment of Urology, Dokkyo Medical University, Mibu, Japan.
Hideyuki AbeDepartment of Urology, Dokkyo Medical University, Mibu, Japan.
Tsengelmaa JamiyanDepartment of Diagnostic Pathology, Dokkyo Medical University, Mibu, Japan.
Kazuyuki IshidaDepartment of Diagnostic Pathology, Dokkyo Medical University, Mibu, Japan.
Hiromichi ShiratakiDepartment of Molecular and Cell Biology, Dokkyo Medical University, Mibu, Japan.
Ken-Ichiro YoshidaDepartment of Urology, Dokkyo Medical University, Mibu, Japan.
Dokkyo Medical University · JPAbbott (Japan) · JP

Funding

Japanese Science Progress Society KAKENHI Grants 17K11156Japanese Science Progress Society KAKENHI Grants 20K09546
6 · The paper itself

Abstract

Succinate dehydrogenase (SDH)-deficient renal cell carcinoma (RCC) is mainly associated with a mutation in the SDHB gene and sometimes with mutations in the SDHC or SDHD genes. However, only three cases of succinate dehydrogenase A (SDHA)-deficient RCC have been reported, and the relation between SDHA mutations and RCC has not been clarified. This study assessed the role of SDHA gene mutations in human RCC. We investigated SDHA/B/C/D gene mutations in 129 human RCCs. Targeted next-generation sequencing and direct Sanger sequencing revealed single nucleotide variants (SNVs) of the SDHA gene with amino acid sequence variations in 11/129 tumors, while no SDHB/C/D gene mutations were found. Tumor cells with SNVs of the SDHA gene were characterized by eosinophilic cytoplasm and various patterns of proliferation. Immunohistochemistry examination found that the 11 tumors with SNVs of the SDHA gene showed significant reduction of SDHA protein and SDHB protein expression compared to the 19 tumors without SDHA or SDHB mutations (both P < .0001). Western blotting showed a greater decrease in the expression of SDHA and SDHB proteins in the 11 tumors with SNVs of the SDHA gene than in the 19 tumors without (both P < .0001). There was a positive correlation between SDHA and SDHB protein levels (P < .0001). On immunohistochemistry and Western blotting, the 11 tumors with SNVs of the SDHA gene had higher protein expression for nuclear factor E2-related factor 2 (Nrf2) compared to the 19 tumors without the mutation (P < .01). These observations suggest that SDHA gene mutations might be associated with a subset of RCC.

Indexed as

Down-RegulationPolymorphism, Single NucleotideAdultAgedCarcinoma, Renal CellElectron Transport Complex IIFemaleGene Expression Regulation, NeoplasticHeLa CellsHigh-Throughput Nucleotide SequencingHumansKidney NeoplasmsMaleMiddle AgedRetrospective StudiesSequence Analysis, DNAElectron Transport Complex IISDHA protein, humanVHL protein, humanVon Hippel-Lindau Tumor Suppressor Proteinfumarate hydratasenext-generation sequencingnuclear factor E2-related factor 2renal cell carcinomasuccinate dehydrogenase

Identifiers

PMID34014604
PMCPMC8353944
OpenAlexW3160881677

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.