Evidence map›Paper›PMID 34013582›Full record

ArticleAnnals of human genetics2021

An analysis of the demographic history of the risk allele R4810K in RNF213 of moyamoya disease.

Kae Koganebuchi, Kimitoshi Sato, Kiyotaka Fujii, Toshihiro Kumabe, Kuniaki Haneji, Takashi Toma, Hajime Ishida, Keiichiro Joh, Hidenobu Soejima, Shuhei Mano and 2 more

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Article in Annals of human genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Kae KoganebuchiDepartment of Biological Structure, Kitasato University Graduate School of Medical Sciences, Sagamihara, Kanagawa, Japan.ORCID 0000-0002-6972-2218
Kimitoshi SatoDepartment of Neurosurgery, Kitasato University School of Medicine, Sagamihara, Kanagawa, Japan.
Kiyotaka FujiiDepartment of Neurosurgery, Kitasato University School of Medicine, Sagamihara, Kanagawa, Japan.
Toshihiro KumabeDepartment of Neurosurgery, Kitasato University School of Medicine, Sagamihara, Kanagawa, Japan.
Kuniaki HanejiDepartment of Human Biology and Anatomy, Graduate School of Medicine, University of the Ryukyus, Nishihara, Okinawa, Japan.
Takashi TomaDepartment of Human Biology and Anatomy, Graduate School of Medicine, University of the Ryukyus, Nishihara, Okinawa, Japan.
Hajime IshidaDepartment of Human Biology and Anatomy, Graduate School of Medicine, University of the Ryukyus, Nishihara, Okinawa, Japan.
Keiichiro JohDivision of Molecular Genetics and Epigenetics, Faculty of Medicine, Department of Biomolecular Sciences, Saga University, Saga, Saga, Japan.
Hidenobu SoejimaDivision of Molecular Genetics and Epigenetics, Faculty of Medicine, Department of Biomolecular Sciences, Saga University, Saga, Saga, Japan.
Shuhei ManoDepartment of Mathematical Analysis and Statistical Inference, The Institute of Statistical Mathematics, Tachikawa, Tokyo, Japan.
Motoyuki OgawaDepartment of Biological Structure, Kitasato University Graduate School of Medical Sciences, Sagamihara, Kanagawa, Japan.
Hiroki OotaDepartment of Biological Structure, Kitasato University Graduate School of Medical Sciences, Sagamihara, Kanagawa, Japan.
Kitasato University · JPUniversity of the Ryukyus · JPSaga University · JPThe Institute of Statistical Mathematics · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRing finger protein 213 (RNF213) is a susceptibility gene of moyamoya disease (MMD). A previous case-control study and a family analysis demonstrated a strong association of the East Asian-specific variant, R4810K (rs112735431), with MMD. Our aim is to uncover evolutionary history of R4810K in East Asian populations.

methodsThe RNF213 locus of 24 MMD patients in Japan were sequenced using targeted-capture sequencing. Based on the sequence data, we conducted population genetic analysis and estimated the age of R4810K using coalescent simulation.

resultsThe diversity of the RNF213 gene was higher in Africans than non-Africans, which can be explained by bottleneck effect of the out-of-Africa migration. Coalescent simulation showed that the risk variant was born in East Asia 14,500-5100 years ago and came to the Japanese archipelago afterward, probably in the period when the known migration based on archaeological evidences occurred.

conclusionsAlthough clinical data show that the symptoms varies, all sequences harboring the risk allele are almost identical with a small number of exceptions, suggesting the MMD phenotypes are unaffected by the variants of this gene and rather would be more affected by environmental factors.

Indexed as

Adenosine TriphosphatasesAllelesEvolution, MolecularGene FrequencyGenetics, PopulationHaplotypesHumansJapanLinkage DisequilibriumMoyamoya DiseaseUbiquitin-Protein LigasesAdenosine TriphosphatasesRNF213 protein, humanUbiquitin-Protein Ligasesage of mutationEast Asia, Jomon people, Moyamoya disease, RNF213, Yayoi immigrants

Identifiers

PMID34013582
PMCPMC8453937
OpenAlexW3161223805

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.