Evidence map›Paper›PMID 34008105›Full record

ArticleArchives of virology2021

A novel temperate phage, vB_PstS-pAN, induced from the naphthalene-degrading bacterium Pseudomonas stutzeri AN10.

Zhou Feng, Xinwu Liu, Miaoxiao Wang, Yong Nie, Xiao-Lei Wu

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Zhou FengCollege of Engineering, Peking University, Beijing, 100871, China.
Xinwu LiuCollege of Engineering, Peking University, Beijing, 100871, China.
Miaoxiao WangCollege of Engineering, Peking University, Beijing, 100871, China.
Yong NieCollege of Engineering, Peking University, Beijing, 100871, China. nieyong@pku.edu.cn.ORCID http://orcid.org/0000-0002-5940-1218
Xiao-Lei WuCollege of Engineering, Peking University, Beijing, 100871, China. xiaolei_wu@pku.edu.cn.ORCID http://orcid.org/0000-0002-9897-6903
Peking University · CN

Funding

National Key R&D Program of China 2018YFA0902100National Key R&D Program of China 2018YFA0902103National Natural Science Foundation of China 91951204
6 · The paper itself

Abstract

A novel temperate phage named vB_PstS-pAN was induced by mitomycin C treatment from the naphthalene-degrading bacterium Pseudomonas stutzeri AN10. The phage particles have icosahedral heads and long non-contractile tails, and vB_PstS-pAN can therefore be morphologically classified as a member of the family Siphoviridae. The whole genome of vB_PstS-pAN is 39,466 bp in length, with an 11-nt 3' overhang cohesive end. There are 53 genes in the vB_PstS-pAN genome, including genes responsible for phage integration, replication, morphogenesis, and bacterial lysis. The vB_PstS-pAN genome has low similarity to other phage genomes in the GenBank database, suggesting that vB_PstS-pAN is a novel member of the family Siphoviridae.

Indexed as

Base CompositionGenome SizeGenome, ViralMitomycinPhylogenyPseudomonas stutzeriSiphoviridaeVirus IntegrationVirus ReplicationWhole Genome SequencingMitomycin

Identifiers

PMID34008105
OpenAlexW3160354892

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.