Evidence map›Paper›PMID 34007001›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2021

Recontacting registry participants with genetic updates through GenomeConnect, the ClinGen patient registry.

Juliann M Savatt, Danielle R Azzariti, David H Ledbetter, Emily Palen, Heidi L Rehm, Erin Rooney Riggs, Christa Lese Martin

Abstract read
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Not Forgotten: Patient Experiences with Genetic Variant Reclassifications.medRxiv : the preprint server for health sciences · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. The Brain Gene Registry: a data snapshot.Journal of neurodevelopmental disorders · 2024
    Article
  8. Clinical variants paired with phenotype: A rich resource for brain gene curation.Genetics in medicine : official journal of the American College of Medical Genetics · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Juliann M SavattAutism & Developmental Medicine Institute, Geisinger, Danville, PA, USA.
Danielle R AzzaritiThe Broad Institute of MIT and Harvard, Cambridge, MA, USA.
David H LedbetterAutism & Developmental Medicine Institute, Geisinger, Danville, PA, USA.
Emily PalenAutism & Developmental Medicine Institute, Geisinger, Danville, PA, USA.
Heidi L RehmThe Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Erin Rooney RiggsAutism & Developmental Medicine Institute, Geisinger, Danville, PA, USA.
Christa Lese MartinAutism & Developmental Medicine Institute, Geisinger, Danville, PA, USA. clmartin@geisinger.edu.ORCID 0000-0002-8071-5780

Funding

Resource ProjectU41HG006834 · NHGRI · BRIGHAM AND WOMEN'S HOSPITAL · PI REHM, HEIDI L · 2013 to 2020
$26.9M
ClinGen AI Data Delivery SupplementU24HG006834 · NHGRI · BROAD INSTITUTE, INC. · PI Marina DiStefano, CHRISTA LESE MARTIN · 2021 to 2026
$26.7M
NHGRI NIH HHS U24 HG006834NHGRI NIH HHS U41 HG006834
6 · The paper itself

Abstract

purposeVariant classifications and gene-disease relationships may evolve. Professional societies have suggested patients share the responsibility to remain up-to-date on the implications genetic results have on their health, and that novel methods of recontact are needed. GenomeConnect, the ClinGen patient registry, has implemented a process to provide variant classification and gene-disease relationship updates to participants. Here, we report on our experience with this recontacting process.

methodsGenomeConnect shares data with ClinVar and Matchmaker Exchange enabling the identification of updates to variant classifications and gene-disease relationships. For any updates identified, the reporting laboratory is contacted, and updates are shared with participants opting to receive them.

resultsOf 1,419 variants shared with ClinVar by GenomeConnect, 49 (3.4%) variant reclassifications were identified and 34 were shared with participants. Of 97 candidate genes submitted to Matchmaker Exchange, 10 (10.3%) gene-disease relationships have been confirmed and 9 were shared with participants. Details available from a subset of participants highlight that updated information is not always shared with the patient by testing laboratories.

conclusionPatient registries can provide a mechanism for patients and their providers to remain informed about changes to the interpretation and clinical significance of their genetic results, leading to important implications for care.

Indexed as

Duty to RecontactGenetic TestingDatabases, GeneticGenetic VariationHumansRegistries

Identifiers

PMID34007001
PMCPMC8463499

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.