Evidence map›Paper›PMID 34003383›Full record

ArticlePlanta2021

Fumarylacetoacetate hydrolase is required for fertility in rice.

Chao Hu, Lihua Huang, Yancheng Chen, Jinling Liu, Zhilong Wang, Bida Gao, Qi Zhu, Chunmei Ren

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Functional Analysis ofFrontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Chao Hu *College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China.
Lihua Huang *College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China.
Yancheng ChenKey Laboratory of Indica Rice Genetics and Breeding in the Middle and Lower Reaches of Yangtze River Valley, Ministry of Agriculture, Hunan Rice Research Institute, Changsha, 410125, China.
Jinling LiuCrop Gene Engineering Key Laboratory of Hunan Province, Hunan Agricultural University, Changsha, 410128, China.
Zhilong WangCrop Gene Engineering Key Laboratory of Hunan Province, Hunan Agricultural University, Changsha, 410128, China.
Bida GaoCollege of Plant Protection, Hunan Agricultural University, Changsha, 410128, China.
Qi ZhuCollege of Horticulture and Landscape, Hunan Agricultural University, Changsha, 410128, China.
Chunmei RenCollege of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, 410128, China. rencm@hunau.net.ORCID http://orcid.org/0000-0002-0709-552X
Hunan Agricultural University · CNHunan Rice Research Institute · CN

Funding

Education Department of Hunan 18A100Ministry of Agriculture in China 2018KLMA03Ministry of Science and Technology of the People's Republic of China 2014CB160308
6 · The paper itself

Abstract

MAIN

conclusionThe rice OsFAH gene functions identically to that of Arabidopsis SSCD1 encoding FAH. Loss of OsFAH causes rice sterility. Fumarylacetoacetate hydrolase (FAH) is the last enzyme in the tyrosine (Tyr) degradation pathway that is crucial for animals. By genetic analysis of the mutant of Short-day Sensitive Cell Death 1 gene encoding Arabidopsis FAH, we first found the pathway also plays a critical role in plants (Han et al., Plant Physiol 162:1956-1964, 2013). To further understand the role of the Tyr degradation pathway in plants, we investigated a biological function of the rice FAH. Firstly, the cDNA of rice FAH gene (OsFAH) was cloned and confirmed to be able to rescue the Arabidopsis Short-day Sensitive Cell Death 1 mutant defective in the FAH. Then, we identified the OsFAH T-DNA insertion mutant and generated the OsFAH RNA interference lines, and found that loss of OsFAH results in rice sterility. Furthermore, we analyzed expression of the OsFAH gene in roots, stems, leaves and young panicles at booting stage of rice and found that its transcript level was highest in young panicles and lowest in roots. In addition, the expression analysis of β-glucuronidase driven by OsFAH promoter in transgenic Arabidopsis showed that the OsFAH promoter was highly active in aerial tissues in vegetative stage, and sepals, filaments and stigma in reproductive stage. These results suggested that FAH plays an important role in rice fertility.

Indexed as

ArabidopsisOryzaAnimalsFertilityGene Expression Regulation, PlantHydrolasesPlants, Genetically ModifiedfumarylacetoacetaseHydrolasesMutant complementationOryza sativa L.OsFAHSterilityTyrosine degradation pathway

Identifiers

PMID34003383
OpenAlexW3163823541

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.