Evidence map›Paper›PMID 34002401›Full record

ArticleJournal of medical virology2021

Evaluation of six different rapid methods for nucleic acid detection of SARS-COV-2 virus.

Sally A Mahmoud, Subhashini Ganesan, Esra Ibrahim, Bhagyashree Thakre, Juliet G Teddy, Preety Raheja, Walid A Zaher

Open access · hybridAbstract readEvaluation Study
In one paragraph

Article in Journal of medical virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

  1. Preparation of FeMikrochimica acta · 2025
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  3. [Implementation of isotermic PCR for detection of SARS-CoV-2 virus].Revista medica del Instituto Mexicano del Seguro Social · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Sally A MahmoudBiogenix Lab G42, Abu Dhabi, UAE.
Subhashini GanesanG42 Healthcare, Abu Dhabi, UAE.ORCID https://orcid.org/0000-0002-2860-3503
Esra IbrahimBiogenix Lab G42, Abu Dhabi, UAE.
Bhagyashree ThakreBiogenix Lab G42, Abu Dhabi, UAE.
Juliet G TeddyBiogenix Lab G42, Abu Dhabi, UAE.
Preety RahejaBiogenix Lab G42, Abu Dhabi, UAE.
Walid A ZaherG42 Healthcare, Abu Dhabi, UAE.
Biogen (United States) · USAbu Dhabi Health Services · AE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the current coronavirus disease 2019 (COVID-19) pandemic there is a mass screening of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) happening around the world due to the extensive spread of the infections. There is a high demand for rapid diagnostic tests to expedite the identification of cases and to facilitate early isolation and control spread. Hence this study evaluates six different rapid nucleic acid detection assays that are commercially available for SARS-CoV-2 virus detection. Nasopharyngeal samples were collected from 4981 participants and were tested for the SARS-CoV-2 virus by the gold standard real-time reverse-transcription polymerase chain reaction (RT-PCR) method and with one of these six rapid methods of detection. Evaluation of the rapid nucleic acid detection assays was done by comparing the results of these rapid methods with the gold standard RT-qPCR results for SARS-COV-2 detection. AQ-TOP had the highest sensitivity (98%) and a strong kappa value of 0.943 followed by Genechecker and Abbot ID NOW. The POCKIT (ii RT-PCR) assay had the highest test accuracy of 99.29% followed by Genechecker and Cobas Liat. Atila iAMP showed the highest percentage of invalid reports (35.5%) followed by AQ-TOP with 6% and POCKIT with 3.7% of invalid reports. Genechecker system, Abbott ID NOW, and Cobas Liat were found to have the best performance and agreement when compared with the standard RT-PCR for COVID-19 detection. With further research, these rapid tests have the potential to be employed in large-scale screening of COVID-19.

Indexed as

COVID-19COVID-19 Nucleic Acid TestingHumansNasopharynxReal-Time Polymerase Chain ReactionSARS-CoV-2Sensitivity and SpecificityUnited Arab EmiratesCOVID-19nucleic acid testsrapid testsSARS-CoV-2

Identifiers

PMID34002401
PMCPMC8242416
OpenAlexW3161138128

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.