Evidence map›Paper›PMID 34002092›Full record

ArticleNature methods2021

PYMEVisualize: an open-source tool for exploring 3D super-resolution data.

Zach Marin, Michael Graff, Andrew E S Barentine, Christian Soeller, Kenny Kwok Hin Chung, Lukas A Fuentes, David Baddeley

Abstract readLetter
PubMed Publisher
In one paragraph

Article in Nature methods, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Organization of Myosin H in the Apical Complex ofbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zach MarinAuckland Bioengineering Institute, University of Auckland, Auckland, New Zealand.ORCID http://orcid.org/0000-0001-5341-9911
Michael GraffDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.
Andrew E S BarentineDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-7673-9771
Christian SoellerLiving Systems Institute and Biomedical Physics, University of Exeter, Exeter, UK.ORCID http://orcid.org/0000-0002-9302-2203
Kenny Kwok Hin ChungDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-2635-6852
Lukas A FuentesDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0003-2422-8088
David BaddeleyAuckland Bioengineering Institute, University of Auckland, Auckland, New Zealand. d.baddeley@auckland.ac.nz.ORCID http://orcid.org/0000-0002-8134-1987

Funding

Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
PREDOCTORAL PROGRAM IN BIOPHYSICST32GM008283 · NIGMS · YALE UNIVERSITY · PI XIONG, YONG · 1988 to 2022
$10.5M
An Integrated Imaging System for High-throughput Nanoscopy of the 4D NucleomeU01EB021232 · NIBIB · YALE UNIVERSITY · PI BEWERSDORF, JOERG · 2015 to 2017
$990k
An Integrated Imaging System for High-throughput Nanoscopy of the 4D NucleomeU01DA047734 · NIDA · YALE UNIVERSITY · PI BEWERSDORF, JOERG · 2018 to 2019
$660k
Biotechnology and Biological Sciences Research Council BB/T007176/1NIBIB NIH HHS U01 EB021232NIDA NIH HHS U01 DA047734NIGMS NIH HHS T32 GM007223NIGMS NIH HHS T32 GM008283Wellcome Trust 203285/B/16/Z
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

SoftwareAlgorithmsMicroscopyUser-Computer Interface

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.