ArticleHeredity2021
Repetitive genomic regions and the inference of demographic history.
Article in Heredity, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed, 28 citations in OpenAlex.
- Clusia genomes shed light on the evolution and diversity of crassulacean acid metabolism physiotypes.Nature communications · 2026Article
- SwarmGenomics: A Unified Pipeline for Individual-Based Whole-Genome Analyses.Molecular ecology resources · 2026Article
- Museum genomics suggests long-term population decline in a putatively extinct bumble bee.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- Genomics Reveals Recent Rapid Speciation of Sea Snakes of the GenusEcology and evolution · 2025Article
- Low genetic diversity and weak population structure of Albizia odoratissima on Hainan Island.BMC plant biology · 2025Article
- Revealing the Demographic History of the European Nightjar (Ecology and evolution · 2024Article
- Chromosome-level genome assembly and demographic history of Euryodendron excelsum in monotypic genus endemic to China.DNA research : an international journal for rapid publication of reports on genes and genomes · 2024Article
- High quality genomes produced from single MinION flow cells clarify polyploid and demographic histories of critically endangered Fraxinus (ash) species.Communications biology · 2024Article
- Hybridization of Atlantic puffins in the Arctic coincides with 20th-century climate change.Science advances · 2023Article
- Whole genome demographic models indicate divergent effective population size histories shape contemporary genetic diversity gradients in a montane bumble bee.Ecology and evolution · 2023Article
- Migratory behaviour is positively associated with genetic diversity in butterflies.Molecular ecology · 2023Article
- The genome of the Paleogene relic tree Bretschneidera sinensis: insights into trade-offs in gene family evolution, demographic history, and adaptive SNPs.DNA research : an international journal for rapid publication of reports on genes and genomes · 2022Article
- Jack of all trades: Genome assembly of Wild Jack and comparative genomics ofFrontiers in plant science · 2022Article
- Impact of model assumptions on demographic inferences: the case study of two sympatric mouse lemurs in northwestern Madagascar.BMC ecology and evolution · 2021Article
Corrections and comments
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Inference of demographic histories using whole-genome datasets has provided insights into diversification, adaptation, hybridization, and plant-pathogen interactions, and stimulated debate on the impact of anthropogenic interventions and past climate on species demography. However, the impact of repetitive genomic regions on these inferences has mostly been ignored by masking of repeats. We use the Populus trichocarpa genome (Pop_tri_v3) to show that masking of repeat regions leads to lower estimates of effective population size (N
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.