Evidence map›Paper›PMID 34001678›Full record

ArticleAging2021

LncRNAs induce oxidative stress and spermatogenesis by regulating endoplasmic reticulum genes and pathways.

Tie-Cheng Sun, Yi Zhang, Kun Yu, Yao Li, Hong Yu, Shan-Jie Zhou, Ya-Peng Wang, Shou-Long Deng, Li Tian

Open access · greenAbstract read
In one paragraph

Article in Aging, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Tie-Cheng SunReproductive Medical Center, Department of Obstetrics and Gynecology, Peking University International Hospital, Beijing 102206, China.
Yi ZhangDepartment of Medicine, Panzhihua University, Sichuan 16700, China.
Kun YuBeijing Key Laboratory for Animal Genetic Improvement, National Engineering Laboratory for Animal Breeding, Key Laboratory of Animal Genetics and Breeding of the Ministry of Agriculture, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
Yao LiBeijing Key Laboratory for Animal Genetic Improvement, National Engineering Laboratory for Animal Breeding, Key Laboratory of Animal Genetics and Breeding of the Ministry of Agriculture, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
Hong YuReproductive Medical Center, Department of Obstetrics and Gynecology, Peking University International Hospital, Beijing 102206, China.
Shan-Jie ZhouReproductive Medical Center, Department of Obstetrics and Gynecology, Peking University International Hospital, Beijing 102206, China.
Ya-Peng WangCenter of Reproductive Medicine, Peking University Third Hospital, Beijing 100191, China.
Shou-Long DengInstitute of Laboratory Animal Sciences, Chinese Academy of Medical Sciences and Comparative Medicine Center, Peking Union Medical College, Beijing 100021, China.
Li TianReproductive Medical Center, Department of Obstetrics and Gynecology, Peking University International Hospital, Beijing 102206, China.
Peking University International Hospital · CNChina Agricultural University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNPanzhihua University · CNPeking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oligozoospermia or low sperm count is a leading cause of male infertility worldwide. Despite decades of work on non-coding RNAs (ncRNAs) as regulators of spermatogenesis, fertilization, and male fertility, the literature on the function of long non-coding RNAs (lncRNAs) in human oligozoospermia is scarce. We integrated lncRNA and mRNA sequencing data from 12 human normozoospermic and oligozoospermic samples and comprehensively analyzed the function of differentially expressed lncRNAs (DE lncRNAs) and mRNAs (DE mRNAs) in male infertility. The target genes of DE lncRNAs were identified using a Gaussian graphical model. Gene ontology terms and Kyoto Encyclopedia of Genes and Genomes pathways were primarily enriched in protein transport and localization to the endoplasmic reticulum (ER). The lncRNA-mRNA co-expression network revealed cis- and trans-regulated target genes of lncRNAs. The transcriptome data implicated DE lncRNAs and DE mRNAs and their target genes in the accumulation of unfolded proteins in sperm ER, PERK-EIF2 pathway-induced ER stress, oxidative stress, and sperm cell apoptosis in individuals with oligozoospermia. These findings suggest that the identified lncRNAs and pathways could serve as effective therapeutic targets for male infertility.

Indexed as

AdultChromosomes, HumanEndoplasmic ReticulumEndoplasmic Reticulum StressFertilityGene Expression ProfilingGene Expression RegulationGene OntologyGene Regulatory NetworksHumansMaleOligospermiaOxidative StressReproducibility of ResultsRNA, Long NoncodingRNA, MessengerRNA, Long NoncodingRNA, Messengerapoptosislong noncoding RNAsoligozoospermiaoxidative stressspermatogenesis

Identifiers

PMID34001678
PMCPMC8202879
OpenAlexW3159603115

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.