Evidence map›Paper›PMID 34001614›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Gut microbiome contributions to altered metabolism in a pig model of undernutrition.

Hao-Wei Chang, Nathan P McNulty, Matthew C Hibberd, David O'Donnell, Jiye Cheng, Vincent Lombard, Bernard Henrissat, Olga Ilkayeva, Michael J Muehlbauer, Christopher B Newgard and 4 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. DietaryFrontiers in veterinary science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Hao-Wei ChangEdison Family Center for Genome Sciences and Systems Biology, Washington University School of Medicine in St. Louis, St. Louis, MO 63110.
Nathan P McNultyEdison Family Center for Genome Sciences and Systems Biology, Washington University School of Medicine in St. Louis, St. Louis, MO 63110.
Matthew C HibberdEdison Family Center for Genome Sciences and Systems Biology, Washington University School of Medicine in St. Louis, St. Louis, MO 63110.ORCID 0000-0001-6520-677X
David O'DonnellEdison Family Center for Genome Sciences and Systems Biology, Washington University School of Medicine in St. Louis, St. Louis, MO 63110.
Jiye ChengEdison Family Center for Genome Sciences and Systems Biology, Washington University School of Medicine in St. Louis, St. Louis, MO 63110.
Vincent LombardArchitecture et Fonction des Macromolécules Biologiques, CNRS, Aix-Marseille Université, 13288 Cedex 9 Marseille, France.ORCID 0000-0002-9684-7067
Bernard HenrissatArchitecture et Fonction des Macromolécules Biologiques, CNRS, Aix-Marseille Université, 13288 Cedex 9 Marseille, France.ORCID 0000-0002-3434-8588
Olga IlkayevaSarah W. Stedman Nutrition and Metabolism Center, Duke University Medical Center, Durham, NC 27710.
Michael J MuehlbauerSarah W. Stedman Nutrition and Metabolism Center, Duke University Medical Center, Durham, NC 27710.
Christopher B NewgardSarah W. Stedman Nutrition and Metabolism Center, Duke University Medical Center, Durham, NC 27710.
Michael J BarrattEdison Family Center for Genome Sciences and Systems Biology, Washington University School of Medicine in St. Louis, St. Louis, MO 63110.
Xi LinLaboratory of Developmental Nutrition, North Carolina State University, Raleigh, NC 27695.
Jack OdleLaboratory of Developmental Nutrition, North Carolina State University, Raleigh, NC 27695.ORCID 0000-0003-4965-2096
Jeffrey I GordonEdison Family Center for Genome Sciences and Systems Biology, Washington University School of Medicine in St. Louis, St. Louis, MO 63110; jgordon@wustl.edu.
Washington University in St. Louis · USDuke University · USCentre National de la Recherche Scientifique · FRNorth Carolina State University · US

Funding

Washington University Nutrition Obesity Research CenterP30DK056341 · NIDDK · WASHINGTON UNIVERSITY · PI Brian N Finck · 1999 to 2026
$30.2M
REGULATION OF GENE EXPRESSION - SMALL INTESTINER01DK030292 · NIDDK · WASHINGTON UNIVERSITY · PI JEFFREY I GORDON, ANDREI L OSTERMAN · 1986 to 2026
$6.5M
REGULATION OF GENE EXPRESSION IN THE SMALL INTESTINER37DK030292 · NIDDK · WASHINGTON UNIVERSITY · PI GORDON, JEFFREY I · 1993 to 2015
$4.0M
NIDDK NIH HHS P30 DK056341NIDDK NIH HHS R01 DK030292NIDDK NIH HHS R37 DK030292
6 · The paper itself

Abstract

The concept that gut microbiome-expressed functions regulate ponderal growth has important implications for infant and child health, as well as animal health. Using an intergenerational pig model of diet restriction (DR) that produces reduced weight gain, we developed a feature-selection algorithm to identify representative characteristics distinguishing DR fecal microbiomes from those of full-fed (FF) pigs as both groups consumed a common sequence of diets during their growth cycle. Gnotobiotic mice were then colonized with DR and FF microbiomes and subjected to controlled feeding with a pig diet. DR microbiomes have reduced representation of genes that degrade dominant components of late growth-phase diets, exhibit reduced production of butyrate, a key host-accessible energy source, and are causally linked to reduced hepatic fatty acid metabolism (β-oxidation) and the selection of alternative energy substrates. The approach described could aid in the development of guidelines for microbiome stewardship in diverse species, including farm animals, in order to support their healthy growth.

Indexed as

Algorithmsalpha-GlucosidasesAnimalsBody WeightButyratesDietDiet TherapyDisease Models, AnimalFecesGastrointestinal MicrobiomeGerm-Free LifeLipid MetabolismLiverMaleMalnutritionMicealpha-GlucosidasesButyratesPhosphoric Monoester HydrolasesStarchSucrosesucrose-phosphataseTaurocholic Acidcarbohydrate-active enzymesfeature selection/information theorygut microbiomemalnutritionmetabolic regulation

Identifiers

PMID34001614
PMCPMC8166152
OpenAlexW3163122587

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.