Evidence map›Paper›PMID 33999154›Full record

ArticleNucleic acids research2021

Two conserved oligomer interfaces of NSP7 and NSP8 underpin the dynamic assembly of SARS-CoV-2 RdRP.

Mahamaya Biswal, Stephen Diggs, Duo Xu, Nelli Khudaverdyan, Jiuwei Lu, Jian Fang, Gregor Blaha, Rong Hai, Jikui Song

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 71 citations in OpenAlex.

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  11. RedefiningMolecular therapy. Nucleic acids · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Mahamaya BiswalDepartment of Biochemistry, University of California-Riverside, Riverside, CA, USA.
Stephen DiggsDepartment of Biochemistry, University of California-Riverside, Riverside, CA, USA.
Duo XuDepartment of Microbiology and Plant Pathology, University of California-Riverside, Riverside, CA, USA.
Nelli KhudaverdyanDepartment of Biochemistry, University of California-Riverside, Riverside, CA, USA.
Jiuwei LuDepartment of Biochemistry, University of California-Riverside, Riverside, CA, USA.
Jian FangDepartment of Biochemistry, University of California-Riverside, Riverside, CA, USA.
Gregor BlahaDepartment of Biochemistry, University of California-Riverside, Riverside, CA, USA.
Rong HaiDepartment of Microbiology and Plant Pathology, University of California-Riverside, Riverside, CA, USA.
Jikui SongDepartment of Biochemistry, University of California-Riverside, Riverside, CA, USA.ORCID 0000-0002-4958-1032
University of California, Riverside · US

Funding

Mechanistic Insights into Mammalian DNA MethylationR35GM119721 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Jikui Song · 2016 to 2026
$5.3M
Mechanistic Insights into flavivirus NS5-mediated STAT2 SuppressionR01AI153419 · NIAID · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI HAI, RONG · 2021 to 2025
$1.9M
Pilatus 6mS10OD021832 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI ADAMS, PAUL DAVID · 2016 to 2016
$980k
Mechanistic understanding and inhibition of Zika NS5 proteinR21AI147057 · NIAID · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI HAI, RONG, SONG, JIKUI · 2019 to 2020
$739k
NIAID NIH HHS R01 AI153419NIAID NIH HHS R21 AI147057NIGMS NIH HHS R35 GM119721NIH HHS S10 OD021832
6 · The paper itself

Abstract

Replication of the ∼30 kb-long coronavirus genome is mediated by a complex of non-structural proteins (NSP), in which NSP7 and NSP8 play a critical role in regulating the RNA-dependent RNA polymerase (RdRP) activity of NSP12. The assembly of NSP7, NSP8 and NSP12 proteins is highly dynamic in solution, yet the underlying mechanism remains elusive. We report the crystal structure of the complex between NSP7 and NSP8 of SARS-CoV-2, revealing a 2:2 heterotetrameric form. Formation of the NSP7-NSP8 complex is mediated by two distinct oligomer interfaces, with interface I responsible for heterodimeric NSP7-NSP8 assembly, and interface II mediating the heterotetrameric interaction between the two NSP7-NSP8 dimers. Structure-guided mutagenesis, combined with biochemical and enzymatic assays, further reveals a structural coupling between the two oligomer interfaces, as well as the importance of these interfaces for the RdRP activity of the NSP7-NSP8-NSP12 complex. Finally, we identify an NSP7 mutation that differentially affects the stability of the NSP7-NSP8 and NSP7-NSP8-NSP12 complexes leading to a selective impairment of the RdRP activity. Together, this study provides deep insights into the structure and mechanism for the dynamic assembly of NSP7 and NSP8 in regulating the replication of the SARS-CoV-2 genome, with important implications for antiviral drug development.

Indexed as

COVID-19Chromatography, GelCoronavirus RNA-Dependent RNA PolymeraseCrystallography, X-RayDimerizationModels, MolecularMultiprotein ComplexesMutagenesisMutationProtein ConformationProtein DomainsProtein Interaction MappingSARS-CoV-2Structure-Activity RelationshipViral Nonstructural ProteinsVirus ReplicationCoronavirus RNA-Dependent RNA PolymeraseMultiprotein ComplexesNS8 protein, SARS-CoV-2NSP12 protein, SARS-CoV-2ORF1ab polyprotein, SARS-CoV-2Viral Nonstructural Proteins

Identifiers

PMID33999154
PMCPMC8191759
OpenAlexW3161720145

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.