Evidence map›Paper›PMID 33998601›Full record

ArticleThe Journal of clinical investigation2021

DACH1 protects podocytes from experimental diabetic injury and modulates PTIP-H3K4Me3 activity.

Aili Cao, Jianhua Li, Morad Asadi, John M Basgen, Bingbing Zhu, Zhengzi Yi, Song Jiang, Tomohito Doke, Osama El Shamy, Niralee Patel and 14 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 41 citations in OpenAlex.

  1. Pooled it
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  16. Epigenetic modification in diabetic kidney disease.Frontiers in endocrinology · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 6 institutions in 2 countries.

Aili CaoDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Jianhua LiDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Morad AsadiDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
John M BasgenLife Science Institute, Charles R. Drew University of Medicine and Science, Los Angeles, California, USA.
Bingbing ZhuDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Zhengzi YiDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Song JiangNational Clinical Research Center of Kidney Diseases, Jinling Hospital, Nanjing University School of Medicine, Nanjing, Jiangsu, China.
Tomohito DokeRenal Electrolyte and Hypertension Division, Perelman School of Medicine at University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Osama El ShamyDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Niralee PatelDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Paolo CravediDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Evren U AzelogluDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Kirk N CampbellDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Madhav MenonDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Steve CocaDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Weijia ZhangDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Hao WangDepartment of Nephrology, Putuo Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai, China.
Ke ZenNational Clinical Research Center of Kidney Diseases, Jinling Hospital, Nanjing University School of Medicine, Nanjing, Jiangsu, China.
Zhihong LiuNational Clinical Research Center of Kidney Diseases, Jinling Hospital, Nanjing University School of Medicine, Nanjing, Jiangsu, China.
Barbara MurphyDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
John C HeDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Vivette D D'AgatiDepartment of Pathology, Columbia University Medical Center, New York, New York, USA.
Katalin SusztakRenal Electrolyte and Hypertension Division, Perelman School of Medicine at University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Lewis KaufmanDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Icahn School of Medicine at Mount Sinai · USNanjing General Hospital of Nanjing Military Command · CNShanghai University of Traditional Chinese Medicine · CNUniversity of Pennsylvania · USCharles R. Drew University of Medicine and Science · USColumbia University Irving Medical Center · US

Funding

Big Omics Data Engine 2 SupercomputerS10OD026880 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2019 to 2019
$2.0M
DACH1 transcriptomic regulation of glucocorticoid-responsive glomerular diseaseR01DK121978 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KAUFMAN, LEWIS · 2020 to 2024
$1.8M
Podocyte to podocyte propagation of hypertrophic signalsR01DK104712 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KAUFMAN, LEWIS · 2016 to 2019
$1.5M
NIDDK NIH HHS R01 DK104712NIDDK NIH HHS R01 DK121978NIH HHS S10 OD026880
6 · The paper itself

Abstract

Dachshund homolog 1 (DACH1), a key cell-fate determinant, regulates transcription by DNA sequence-specific binding. We identified diminished Dach1 expression in a large-scale screen for mutations that convert injury-resistant podocytes into injury-susceptible podocytes. In diabetic kidney disease (DKD) patients, podocyte DACH1 expression levels are diminished, a condition that strongly correlates with poor clinical outcomes. Global Dach1 KO mice manifest renal hypoplasia and die perinatally. Podocyte-specific Dach1 KO mice, however, maintain normal glomerular architecture at baseline, but rapidly exhibit podocyte injury after diabetes onset. Furthermore, podocyte-specific augmentation of DACH1 expression in mice protects from DKD. Combined RNA sequencing and in silico promoter analysis reveal conversely overlapping glomerular transcriptomic signatures between podocyte-specific Dach1 and Pax transactivation-domain interacting protein (Ptip) KO mice, with upregulated genes possessing higher-than-expected numbers of promoter Dach1-binding sites. PTIP, an essential component of the activating histone H3 lysine 4 trimethylation (H3K4Me3) complex, interacts with DACH1 and is recruited by DACH1 to its promoter-binding sites. DACH1-PTIP recruitment represses transcription and reduces promoter H3K4Me3 levels. DACH1 knockdown in podocytes combined with hyperglycemia triggers target gene upregulation and increases promoter H3K4Me3. These findings reveal that in DKD, diminished DACH1 expression enhances podocyte injury vulnerability via epigenetic derepression of its target genes.

Indexed as

AnimalsDiabetes Mellitus, ExperimentalDiabetic NephropathiesDNA-Binding ProteinsEye ProteinsHistonesMiceMice, KnockoutPodocytesDach1 protein, mouseDNA-Binding ProteinsEye Proteinshistone H3 trimethyl Lys4HistonesPaxip1 protein, mouseChronic kidney diseaseDiabetesEpigeneticsNephrology

Identifiers

PMID33998601
PMCPMC8121508
OpenAlexW3162645109

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.