Evidence map›Paper›PMID 33998118›Full record

ArticleEnvironmental microbiology2021

The quorum-sensing systems of Vibrio campbellii DS40M4 and BB120 are genetically and functionally distinct.

Chelsea A Simpson, Blake D Petersen, Nicholas W Haas, Logan J Geyman, Aimee H Lee, Ram Podicheti, Robert Pepin, Laura C Brown, Douglas B Rusch, Michael P Manzella and 2 more

Open access · greenAbstract read
In one paragraph

Article in Environmental microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  3. Quorum sensing regulates virulence factors in the coral pathogenApplied and environmental microbiology · 2025
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  5. Mobile-CRISPRi as a powerful tool for modulatingApplied and environmental microbiology · 2024
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  6. Light-emitting plants development by inoculating of Vibrio campbellii RMT1 on the rhizospheric zone of Aglaonema cochinchinense.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2024
    Article
  7. Article
  8. Article
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  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Chelsea A Simpson *Department of Biology, Indiana University, Bloomington, IN, USA.
Blake D Petersen *Department of Biology, Indiana University, Bloomington, IN, USA.
Nicholas W HaasDepartment of Biology, Indiana University, Bloomington, IN, USA.
Logan J GeymanDepartment of Biology, Indiana University, Bloomington, IN, USA.
Aimee H LeeDepartment of Biology, Indiana University, Bloomington, IN, USA.
Ram PodichetiCentre for Genomics and Bioinformatics, Indiana University, Bloomington, IN, USA.
Robert PepinMass Spectrometry Facility, Indiana University, Bloomington, IN, USA.
Laura C BrownDepartment of Chemistry, Indiana University, Bloomington, IN, USA.
Douglas B RuschCentre for Genomics and Bioinformatics, Indiana University, Bloomington, IN, USA.
Michael P ManzellaDepartment of Biology, Indiana University, Bloomington, IN, USA.
Kai PapenfortFriedrich Schiller University, Institute of Microbiology, Jena, Germany.
Julia C van KesselDepartment of Biology, Indiana University, Bloomington, IN, USA.ORCID 0000-0002-1612-2403
Indiana University Bloomington · USFriedrich Schiller University Jena · DEIONICS Mass Spectrometry (Canada) · CA

Funding

Quorum sensing regulation of bacterial developmentR35GM124698 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI Julia C. van Kessel · 2017 to 2026
$4.1M
NIGMS NIH HHS R35 GM124698
6 · The paper itself

Abstract

Vibrio campbellii BB120 (previously classified as Vibrio harveyi) is a fundamental model strain for studying quorum sensing in vibrios. A phylogenetic evaluation of sequenced Vibrio strains in Genbank revealed that BB120 is closely related to the environmental isolate V. campbellii DS40M4. We exploited DS40M4's competence for exogenous DNA uptake to rapidly generate greater than 30 isogenic strains with deletions of genes encoding BB120 quorum-sensing system homologues. Our results show that the quorum-sensing circuit of DS40M4 is distinct from BB120 in three ways: (i) DS40M4 does not produce an acyl homoserine lactone autoinducer but encodes an active orphan LuxN receptor, (ii) the quorum regulatory small RNAs (Qrrs) are not solely regulated by autoinducer signalling through the response regulator LuxO and (iii) the DS40M4 quorum-sensing regulon is much smaller than BB120 (~100 genes vs. ~400 genes, respectively). Using comparative genomics to expand our understanding of quorum-sensing circuit diversity, we observe that conservation of LuxM/LuxN proteins differs widely both between and within Vibrio species. These strains are also phenotypically distinct: DS40M4 exhibits stronger interbacterial cell killing, whereas BB120 forms more robust biofilms and is bioluminescent. These results underscore the need to examine wild isolates for a broader view of bacterial diversity in the marine ecosystem.

Indexed as

Quorum SensingVibrioBacterial ProteinsEcosystemPhylogenyBacterial Proteins

Identifiers

PMID33998118
PMCPMC8458232
OpenAlexW3160478451

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.