Evidence map›Paper›PMID 33997789›Full record

ArticleNature cancer2021

CDK4/6 inhibition reprograms the breast cancer enhancer landscape by stimulating AP-1 transcriptional activity.

April C Watt, Paloma Cejas, Molly J DeCristo, Otto Metzger-Filho, Enid Y N Lam, Xintao Qiu, Haley BrinJones, Nikolas Kesten, Rhiannon Coulson, Alba Font-Tello and 23 more

Open access · greenAbstract read
In one paragraph

Article in Nature cancer, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 108 citations in OpenAlex.

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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

33 authors at 9 institutions in 4 countries.

April C Watt *Peter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0002-5145-5334
Paloma Cejas *Center for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.
Molly J DeCristo *Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.
Otto Metzger-FilhoDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Enid Y N LamPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0001-5843-7836
Xintao QiuCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-8560-7017
Haley BrinJonesDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.
Nikolas KestenCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-9183-8778
Rhiannon CoulsonPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Alba Font-TelloCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.
Klothilda LimCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.
Raga VadhiCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.
Veerle W DanielsDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Joan MonteroDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-9192-4836
Len TaingCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.
Clifford A MeyerCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.
Omer GilanPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.
Charles C BellPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0003-2194-8311
Keegan D KorthauerDepartment of Data Sciences, Dana-Farber Cancer Institute, Boston, MA, USA.
Claudia GiambartolomeiDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0003-2786-1225
Bogdan PasaniucDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Ji-Heui SeoCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.
Matthew L FreedmanCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-0151-1238
Cynthia MaDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO, USA.ORCID http://orcid.org/0000-0002-8156-7492
Matthew J EllisLester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX, USA.
Ian KropDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Eric WinerDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Anthony LetaiDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0002-1993-9013
Myles BrownCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA.
Mark A DawsonPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia.ORCID http://orcid.org/0000-0002-5464-5029
Henry W LongCenter for Functional Cancer Epigenetics, Dana-Farber Cancer Institute, Boston, MA, USA. Henry_Long@dfci.harvard.edu.ORCID http://orcid.org/0000-0001-6849-6629
Jean J ZhaoDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA. Jean_Zhao@dfci.harvard.edu.ORCID http://orcid.org/0000-0002-4561-5688
Shom GoelPeter MacCallum Cancer Centre, Melbourne, Victoria, Australia. shom.goel@petermac.org.ORCID http://orcid.org/0000-0001-8329-9084
Dana-Farber Cancer Institute · USThe University of Melbourne · AUUniversity of California, Los Angeles · USBaylor College of Medicine · USBroad Institute · USHarvard University · USHospital Universitario La Paz · ESPeter MacCallum Cancer Centre · AUWashington University in St. Louis · US

Funding

Use of Organotypic and Mammary Gland Models to Investigate the Outcomes of ClonalP01CA080111 · NCI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI WEINBERG, ROBERT A · 1999 to 2018
$36.0M
Targeting the Vasular SystemP50CA165962 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI WENDY Beth LONDON · 2013 to 2026
$33.5M
Tissue and Pathology CoreP50CA168504 · NCI · DANA-FARBER CANCER INST · PI Nabihah Tayob · 2013 to 2026
$30.1M
Project-002U41HG004059 · NHGRI · ROSWELL PARK CANCER INSTITUTE CORP · PI MORGAN, MARTIN T · 2011 to 2020
$13.2M
Integrating targeted therapy and immunotherapy to break through cancerR35CA210057 · NCI · DANA-FARBER CANCER INST · PI Jean Zhao · 2016 to 2026
$10.8M
Tissue and Pathology CoreP01CA250959 · NCI · DANA-FARBER CANCER INST · PI BROWN, MYLES A · 2020 to 2024
$8.6M
Preprocessing and Analysis Tools for High-Throughput TechnologiesR01GM083084 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI IRIZARRY, RAFAEL ANGEL · 2007 to 2018
$4.4M
Overcoming bias and unwanted variability in next generation sequencingR01HG005220 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI IRIZARRY, RAFAEL ANGEL · 2010 to 2018
$3.6M
Defining the epigenetic landscape in human prostate cancerR01CA193910 · NCI · DANA-FARBER CANCER INST · PI BROWN, MYLES A, FREEDMAN, MATTHEW L · 2015 to 2019
$3.1M
NCI NIH HHS P01 CA080111NCI NIH HHS P01 CA250959NCI NIH HHS P50 CA165962NCI NIH HHS P50 CA168504NCI NIH HHS R01 CA193910NCI NIH HHS R35 CA210057NHGRI NIH HHS R01 HG005220NHGRI NIH HHS U41 HG004059NIGMS NIH HHS R01 GM083084
6 · The paper itself

Abstract

Pharmacologic inhibitors of cyclin-dependent kinases 4 and 6 (CDK4/6) were designed to induce cancer cell cycle arrest. Recent studies have suggested that these agents also exert other effects, influencing cancer cell immunogenicity, apoptotic responses, and differentiation. Using cell-based and mouse models of breast cancer together with clinical specimens, we show that CDK4/6 inhibitors induce remodeling of cancer cell chromatin characterized by widespread enhancer activation, and that this explains many of these effects. The newly activated enhancers include classical super-enhancers that drive luminal differentiation and apoptotic evasion, as well as a set of enhancers overlying endogenous retroviral elements that is enriched for proximity to interferon-driven genes. Mechanistically, CDK4/6 inhibition increases the level of several Activator Protein-1 (AP-1) transcription factor proteins, which are in turn implicated in the activity of many of the new enhancers. Our findings offer insights into CDK4/6 pathway biology and should inform the future development of CDK4/6 inhibitors.

Indexed as

Breast NeoplasmsTranscription Factor AP-1AnimalsCell Cycle CheckpointsCyclin-Dependent Kinase 4FemaleGenes, cdcHumansMiceCDK4 protein, humanCyclin-Dependent Kinase 4Transcription Factor AP-1

Identifiers

PMID33997789
PMCPMC8115221
OpenAlexW3099678391

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.