Evidence map›Paper›PMID 33995914›Full record

ArticleComputational and structural biotechnology journal2021

Rational engineering of the lccβ

Alessandro Chiadò, Francesca Bosco, Marco Bardelli, Luca Simonelli, Mattia Pedotti, Luca Marmo, Luca Varani

Open access · goldAbstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 34 citations in OpenAlex.

  1. Construction and utilization of FeComputational and structural biotechnology journal · 2025
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Alessandro ChiadòDepartment of Applied Science and Technology, Politecnico di Torino Corso, Duca degli Abruzzi 24, 10129 Torino, Italy.
Francesca BoscoDepartment of Applied Science and Technology, Politecnico di Torino Corso, Duca degli Abruzzi 24, 10129 Torino, Italy.
Marco BardelliInstitute for Research in Biomedicine, Università della Svizzera Italiana, Via Vincenzo Vela 6, 6500, Bellinzona, Switzerland.
Luca SimonelliInstitute for Research in Biomedicine, Università della Svizzera Italiana, Via Vincenzo Vela 6, 6500, Bellinzona, Switzerland.
Mattia PedottiInstitute for Research in Biomedicine, Università della Svizzera Italiana, Via Vincenzo Vela 6, 6500, Bellinzona, Switzerland.
Luca MarmoDepartment of Applied Science and Technology, Politecnico di Torino Corso, Duca degli Abruzzi 24, 10129 Torino, Italy.
Luca VaraniInstitute for Research in Biomedicine, Università della Svizzera Italiana, Via Vincenzo Vela 6, 6500, Bellinzona, Switzerland.
Università della Svizzera italiana · CHPolitecnico di Torino · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Laccases are among the most sought-after biocatalyst for many green applications, from biosensors to pollution remedial, because they simply need oxygen from the air to oxidize and degrade a broad range of substrates. However, natural laccases cannot process large and toxic polycyclic aromatic hydrocarbons (PAHs) except in the presence of small molecules, called mediators, which facilitate the reaction but are inconvenient for practical on-field applications. Here we exploited structure-based protein engineering to generate rationally modified fungal laccases with increased ability to process bulky PAHs even in a mediator-less reaction. Computational simulations were used to estimate the impact of mutations in the enzymatic binding pocket on the ability to bind and oxidize a selected set of organic compounds. The most promising mutants were produced and their activity was evaluated by biochemical assays with phenolic and non-phenolic substrates. Mutant laccases engineered with a larger binding pocket showed enhanced activity (up to ~ 300% at pH 3.0) in a wider range of pH values (3.0-8.0) in comparison to the wild type enzyme. In contrast to the natural laccase, these mutants efficiently degraded bulky and harmful triphenylmethane dyes such as Ethyl Green (up to 91.64% after 24 h), even in the absence of mediators, with positive implications for the use of such modified laccases in many green chemistry processes (e.g. wastewater treatment).

Indexed as

Computational dockingOrganic dye degradationPolycyclic aromatic hydrocarbonRational designSite directed mutagenesisTrametes versicolor laccase

Identifiers

PMID33995914
PMCPMC8099718
OpenAlexW3156768301

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.