Evidence map›Paper›PMID 33995907›Full record

ArticleComputational and structural biotechnology journal2021

Genome-wide screening of circadian and non-circadian impact of Neat1 genetic deletion.

Audrey Jacq, Denis Becquet, Maria-Montserrat Bello-Goutierrez, Bénédicte Boyer, Séverine Guillen, Jean-Louis Franc, Anne-Marie François-Bellan

Open access · goldAbstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 58% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Long Non-coding RNAs and CRISPR-Cas Edition in Tumorigenesis.Advances in experimental medicine and biology · 2023
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Audrey JacqAix-Marseille Univ, CNRS, INP, Institut de Neurophysiopathologie, UMR 7051, 27 Bd Jean Moulin Faculté des Sciences Médicales et Paramédicales, Campus Timone, 13385 Marseille Cedex 05, France.
Denis BecquetAix-Marseille Univ, CNRS, INP, Institut de Neurophysiopathologie, UMR 7051, 27 Bd Jean Moulin Faculté des Sciences Médicales et Paramédicales, Campus Timone, 13385 Marseille Cedex 05, France.
Maria-Montserrat Bello-GoutierrezAix-Marseille Univ, CNRS, INP, Institut de Neurophysiopathologie, UMR 7051, 27 Bd Jean Moulin Faculté des Sciences Médicales et Paramédicales, Campus Timone, 13385 Marseille Cedex 05, France.
Bénédicte BoyerAix-Marseille Univ, CNRS, INP, Institut de Neurophysiopathologie, UMR 7051, 27 Bd Jean Moulin Faculté des Sciences Médicales et Paramédicales, Campus Timone, 13385 Marseille Cedex 05, France.
Séverine GuillenAix-Marseille Univ, CNRS, INP, Institut de Neurophysiopathologie, UMR 7051, 27 Bd Jean Moulin Faculté des Sciences Médicales et Paramédicales, Campus Timone, 13385 Marseille Cedex 05, France.
Jean-Louis FrancAix-Marseille Univ, CNRS, INP, Institut de Neurophysiopathologie, UMR 7051, 27 Bd Jean Moulin Faculté des Sciences Médicales et Paramédicales, Campus Timone, 13385 Marseille Cedex 05, France.
Anne-Marie François-BellanAix-Marseille Univ, CNRS, INP, Institut de Neurophysiopathologie, UMR 7051, 27 Bd Jean Moulin Faculté des Sciences Médicales et Paramédicales, Campus Timone, 13385 Marseille Cedex 05, France.
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The functions of the long non-coding RNA, Nuclear enriched abundant transcript 1 (Neat1), are poorly understood. Neat1 is required for the formation of paraspeckles, but its respective paraspeckle-dependent or independent functions are unknown. Several studies including ours reported that Neat1 is involved in the regulation of circadian rhythms. We characterized the impact of Neat1 genetic deletion in a rat pituitary cell line. The mRNAs whose circadian expression pattern or expression level is regulated by Neat1 were identified after high-throughput RNA sequencing of the circadian transcriptome of wild-type cells compared to cells in which Neat1 was deleted by CRISPR/Cas9. The numerous RNAs affected by Neat1 deletion were found to be circadian or non-circadian, targets or non-targets of paraspeckles, and to be associated with many key biological processes showing that Neat1, in interaction with the circadian system or independently, could play crucial roles in key physiological functions through diverse mechanisms.

Indexed as

Circadian gene expressionCRISPR/Cas9 editionLong non-coding RNA Neat1ParaspecklesRNA-sequencing

Identifiers

PMID33995907
PMCPMC8085668
OpenAlexW3154883075

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.