Evidence map›Paper›PMID 33994552›Full record

ArticleChemical physics letters2021

Low rotational barriers for the most dynamically active methyl groups in the proposed antiviral drugs for treatment of SARS-CoV-2, apilimod and tetrandrine.

Eugene Mamontov, Yongqiang Cheng, Luke L Daemen, Alexander I Kolesnikov, Anibal J Ramirez-Cuesta, Matthew R Ryder, Matthew B Stone

Open access · greenAbstract read
In one paragraph

Article in Chemical physics letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Eugene MamontovNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Yongqiang ChengNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Luke L DaemenNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Alexander I KolesnikovNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Anibal J Ramirez-CuestaNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Matthew R RyderNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Matthew B StoneNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.
Oak Ridge National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A recent screening study highlighted a molecular compound, apilimod, for its efficacy against the SARS-CoV-2 virus, while another compound, tetrandrine, demonstrated a remarkable synergy with the benchmark antiviral drug, remdesivir. Here, we find that because of significantly reduced potential energy barriers, which also give rise to pronounced quantum effects, the rotational dynamics of the most dynamically active methyl groups in apilimod and tetrandrine are much faster than those in remdesivir. Because dynamics of methyl groups are essential for biochemical activity, screening studies based on the computed potential energy profiles may help identify promising candidates within a given class of drugs.

Indexed as

DFT calculationsInelastic neutron scatteringMicroscopic dynamicsMolecular drugsQuasielastic neutron scattering

Identifiers

PMID33994552
PMCPMC8105138
OpenAlexW3159081697

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.