Evidence map›Paper›PMID 33992775›Full record

ArticleMethods (San Diego, Calif.)2021

Trans ligation of RNAs to generate hybrid circular RNAs using highly efficient autocatalytic transcripts.

Jacob L Litke, Samie R Jaffrey

Open access · greenAbstract read
In one paragraph

Article in Methods (San Diego, Calif.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. RNA-Based Therapeutic Technology.International journal of molecular sciences · 2023
    Review
  3. Circular RNA vaccine in disease prevention and treatment.Signal transduction and targeted therapy · 2023
    Review
  4. Noncoding RNAs: biology and applications-a Keystone Symposia report.Annals of the New York Academy of Sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jacob L LitkeDepartment of Pharmacology, Weill-Cornell Medical College, Cornell University, New York, NY 10065, USA.
Samie R JaffreyDepartment of Pharmacology, Weill-Cornell Medical College, Cornell University, New York, NY 10065, USA. Electronic address: srj2003@med.cornell.edu.
Cornell University · US

Funding

New mechanisms and technologies for understanding post-transcriptional gene regulation in neuronsR35NS111631 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI SAMIE R JAFFREY · 2019 to 2026
$8.6M
Engineered circular RNAs: A novel platform for genetically encoded RNA-based biosensors and their application as real-time viral infection reportersF31AI134100 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI LITKE, JACOB · 2017 to 2019
$123k
NIAID NIH HHS F31 AI134100NINDS NIH HHS R35 NS111631
6 · The paper itself

Abstract

Circular RNAs are useful entities for various biotechnology applications, such as templating translation and binding or sequestering miRNA and RNA binding proteins. Circular RNA as highly resistant to degradation in cells and are more long-lived than linear RNAs. Here, we describe a method for intracellular trans ligation of RNA transcripts that can generate hybrid circular RNAs. These hybrid circular RNAs comprise two separate RNA that are covalently linked by ligation to form a circular RNA. By incorporating self-cleaving ribozymes at each site of ligation, trans ligation of the transcripts occurs in mammalian cells with no additional material. We provide a protocol for designing and testing trans ligation of transcripts and demonstrate detection of hybrid circular RNAs using fluorescence microscopy.

Indexed as

RNA, CatalyticRNA, CircularAnimalsMammalsNucleic Acid ConformationRNARNA-Binding ProteinsRNARNA-Binding ProteinsRNA, CatalyticRNA, Circularcircular RNAexpression systemRNA ligationsynthetic biology

Identifiers

PMID33992775
PMCPMC8589881
OpenAlexW3160496313

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.